Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0454200-01 | Rice | plastid | 63.95 | 67.07 |
| Os11t0454000-01 | Rice | cytosol | 62.79 | 65.85 |
| Os11t0453900-01 | Rice | nucleus | 52.91 | 60.26 |
| Os11t0451700-00 | Rice | plastid | 56.98 | 30.06 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4350454 | ProteinID:AAX96128.1 | ProteinID:ABA93494.1 | EMBL:AK121952 | ProteinID:BAF28207.1 |
| ProteinID:BAT13917.1 | InterPro:Dehydrin | InterPro:Dehydrin_CS | ProteinID:EAZ18263.1 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009414 |
| GO:GO:0009415 | GO:GO:0009628 | GO:GO:0009631 | GO:GO:0009719 | GO:GO:0009737 | EnsemblPlantsGene:Os11g0454300 |
| EnsemblPlants:Os11t0454300-01 | PFAM:PF00257 | ScanProsite:PS00315 | ScanProsite:PS00823 | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF4 |
| UniProt:Q2R4Z4 | UniParc:UPI0000509585 | RefSeq:XP_015617608.1 | SEG:seg | : | : |
Description
RESPONSIVE TO ABA GENE 16ASimilar to Water-stress inducible protein RAB21. (Os11t0454300-01)
Coordinates
chr11:-:15342877..15343671
Molecular Weight (calculated)
17327.1 Da
IEP (calculated)
9.854
GRAVY (calculated)
-1.076
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHQGQHGHV TSRVDEYGNP VGTGAGHGQM GTAGMGTHGT TGGMGTHGTT GGMGTHGTTG TGGGQFQPMR EEHKTGGVLQ RSGSSSSSSS EDDGMGGRRK
101: KGIKEKIKEK LPGGNKGEQQ HAMGGTGGAY GQQGHGTGMT TGTTGAHGTT TTDTGEKKGI MDKIKEKLPG QH
101: KGIKEKIKEK LPGGNKGEQQ HAMGGTGGAY GQQGHGTGMT TGTTGAHGTT TTDTGEKKGI MDKIKEKLPG QH
001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
Arabidopsis Description
RAB18RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.