Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0454200-01 | Rice | plastid | 90.85 | 90.85 |
| Os11t0454300-01 | Rice | plastid | 65.85 | 62.79 |
| Os11t0453900-01 | Rice | nucleus | 49.39 | 53.64 |
| TraesCS3B01G428200.1 | Wheat | cytosol | 59.76 | 35.77 |
| TraesCS3A01G396200.1 | Wheat | cytosol | 59.76 | 35.64 |
| TraesCS3D01G390200.1 | Wheat | cytosol | 56.1 | 33.45 |
| HORVU3Hr1G089300.1 | Barley | cytosol | 59.15 | 30.89 |
| Os11t0451700-00 | Rice | plastid | 57.93 | 29.14 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4350452 | ProteinID:AAX96131.1 | ProteinID:ABA93491.1 | EMBL:AK071366 | ProteinID:BAF28205.1 |
| ProteinID:BAT13914.1 | InterPro:Dehydrin | InterPro:Dehydrin_CS | ProteinID:EAZ18260.1 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009414 |
| GO:GO:0009415 | GO:GO:0009628 | GO:GO:0009631 | GO:GO:0009719 | GO:GO:0009737 | EnsemblPlantsGene:Os11g0454000 |
| EnsemblPlants:Os11t0454000-01 | PFAM:PF00257 | ScanProsite:PS00315 | ScanProsite:PS00823 | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF3 |
| UniProt:Q2R4Z7 | UniParc:UPI0000509588 | RefSeq:XP_015617610.1 | SEG:seg | : | : |
Description
RESPONSIVE TO ABA GENE 16CDehydrin RAB 16C. (Os11t0454000-01)
Coordinates
chr11:-:15327769..15328657
Molecular Weight (calculated)
16725.4 Da
IEP (calculated)
9.762
GRAVY (calculated)
-1.049
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MENYQGQHGY GADRVDVYGN PVAGQYGGGA TAPGGGHGVM GMGGHHAGAG GQFQPVKEEH KTGGILHRSG SSSSSSSSED DGMGGRRKKG IKEKIKEKLP
101: GGNKGNNQQQ QQMMGNTGGA YGQQGHAGMT GAGTGTGVHG AEYGNTGEKK GFMDKIKEKL PGQH
101: GGNKGNNQQQ QQMMGNTGGA YGQQGHAGMT GAGTGTGVHG AEYGNTGEKK GFMDKIKEKL PGQH
001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
Arabidopsis Description
RAB18RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.