Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G428200.1 | Wheat | cytosol | 90.55 | 90.88 |
| TraesCS3A01G396200.1 | Wheat | cytosol | 88.73 | 88.73 |
| HORVU3Hr1G089300.1 | Barley | cytosol | 88.0 | 77.07 |
| TraesCS5D01G433300.1 | Wheat | cytosol | 34.18 | 61.04 |
| TraesCS5D01G433200.1 | Wheat | cytosol | 33.45 | 60.53 |
| TraesCS6D01G333200.1 | Wheat | cytosol | 32.0 | 56.77 |
| Os11t0454000-01 | Rice | cytosol | 33.45 | 56.1 |
| Os11t0454200-01 | Rice | plastid | 33.45 | 56.1 |
| TraesCS6D01G333100.1 | Wheat | cytosol | 29.09 | 55.56 |
| TraesCS6D01G333300.1 | Wheat | cytosol | 31.64 | 54.38 |
| TraesCS6D01G333600.1 | Wheat | cytosol | 32.36 | 53.29 |
| TraesCS6D01G333000.1 | Wheat | cytosol | 31.27 | 53.09 |
| TraesCS5D01G379200.1 | Wheat | cytosol | 26.91 | 51.75 |
| TraesCS5D01G379300.1 | Wheat | cytosol | 23.64 | 48.87 |
| TraesCS6D01G332900.2 | Wheat | cytosol | 35.64 | 42.42 |
| TraesCS4D01G063100.1 | Wheat | cytosol | 30.55 | 19.53 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G390200.1 | EnsemblPlantsGene:TraesCS3D01G390200 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF4 | PFAM:PF00257 | ScanProsite:PS00315 |
| ScanProsite:PS00823 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:505318927..505319898
Molecular Weight (calculated)
27158.6 Da
IEP (calculated)
10.260
GRAVY (calculated)
-0.855
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFQGQQGNR VDQHGNPVAA APGATAVTGA PAGGQLQPGR EEHKTRGILH RSSSSSSSSS EDDGMGGRRK KGIKEKIKDK LPGARKQTYG QPAAPAGMTG
101: TGATGGPYYV QPAPAGTGAH GTTATTGTYG QPAPAGMTGT GAHGTTATGE KKGMKDKIME KLPGGHKNEQ HTMPTAGAYG QPGMTGTGVH GNTAPGGGYG
201: GQPGHAGMIG TGTHGSGTTG GPYDHQGHPG VTGTGAHGTT ATGGAYNQQG HAGVTGTGEK KGIMGKIKEK LPGQH
101: TGATGGPYYV QPAPAGTGAH GTTATTGTYG QPAPAGMTGT GAHGTTATGE KKGMKDKIME KLPGGHKNEQ HTMPTAGAYG QPGMTGTGVH GNTAPGGGYG
201: GQPGHAGMIG TGTHGSGTTG GPYDHQGHPG VTGTGAHGTT ATGGAYNQQG HAGVTGTGEK KGIMGKIKEK LPGQH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.