Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G396200.1 | Wheat | cytosol | 93.07 | 92.73 |
| TraesCS3D01G390200.1 | Wheat | cytosol | 90.88 | 90.55 |
| HORVU3Hr1G089300.1 | Barley | cytosol | 83.58 | 72.93 |
| TraesCS5B01G426800.1 | Wheat | cytosol | 33.58 | 61.33 |
| TraesCS5B01G426700.1 | Wheat | cytosol | 33.21 | 60.67 |
| Os11t0454000-01 | Rice | cytosol | 35.77 | 59.76 |
| Os11t0454200-01 | Rice | plastid | 35.4 | 59.15 |
| TraesCS6B01G383600.1 | Wheat | cytosol | 33.58 | 58.23 |
| TraesCS6B01G383800.1 | Wheat | cytosol | 34.31 | 56.63 |
| TraesCS5B01G372100.1 | Wheat | cytosol | 27.37 | 52.45 |
| TraesCS5B01G372200.1 | Wheat | cytosol | 25.55 | 50.72 |
| TraesCS6B01G383500.2 | Wheat | cytosol | 37.96 | 45.02 |
| TraesCS4B01G064200.1 | Wheat | cytosol | 31.02 | 18.6 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G428200.1 | EnsemblPlantsGene:TraesCS3B01G428200 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF4 | PFAM:PF00257 | ScanProsite:PS00315 |
| ScanProsite:PS00823 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:667112297..667113257
Molecular Weight (calculated)
27195.7 Da
IEP (calculated)
10.291
GRAVY (calculated)
-0.859
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYQGQQGNR VDRYGNPVAA PGGATAVTGA PAGGQLQPAR EEHKTRGILH RSSSSSSSSS EDDGMGGRRK KGIKEKIKEK LPGARKQTYG QPAAPAGMTG
101: TGATGGPYYV QPAPAGTGAH GTTATTGPYG QPAPAGMTGT GAHGTTATGE KKGMKDKIME KLPGGHKNEQ HTMPTAGAYG QPGMTGTGVH GNTAPGGGYG
201: QPGHAGMTGT GTHGNVTTGG AFDHQGHPGV TGTGAHGTTA TGGPYSQQGH AGVTGTGEKK GIMGKIKEKL PGQH
101: TGATGGPYYV QPAPAGTGAH GTTATTGPYG QPAPAGMTGT GAHGTTATGE KKGMKDKIME KLPGGHKNEQ HTMPTAGAYG QPGMTGTGVH GNTAPGGGYG
201: QPGHAGMTGT GTHGNVTTGG AFDHQGHPGV TGTGAHGTTA TGGPYSQQGH AGVTGTGEKK GIMGKIKEKL PGQH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.