Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EES18117 | Sorghum | cytosol | 24.23 | 61.84 |
Zm00001d010102_P001 | Maize | cytosol | 45.1 | 54.18 |
Zm00001d010105_P001 | Maize | cytosol | 44.85 | 53.87 |
Zm00001d045321_P001 | Maize | cytosol | 45.1 | 53.68 |
Zm00001d010119_P001 | Maize | extracellular | 44.33 | 52.92 |
Os11t0451700-00 | Rice | plastid | 37.11 | 44.17 |
TraesCS4D01G063100.1 | Wheat | cytosol | 36.34 | 32.79 |
TraesCS4A01G250900.1 | Wheat | cytosol | 36.6 | 31.21 |
TraesCS4B01G064200.1 | Wheat | cytosol | 36.08 | 30.63 |
Zm00001d010094_P001 | Maize | cytosol | 25.77 | 29.41 |
Protein Annotations
MapMan:35.2 | EntrezGene:8071330 | UniProt:C5Z4B8 | InterPro:Dehydrin | InterPro:Dehydrin_CS | EnsemblPlants:EER87862 |
ProteinID:EER87862 | ProteinID:EER87862.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0005829 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009414 | GO:GO:0009415 | GO:GO:0009628 |
GO:GO:0009631 | GO:GO:0009719 | GO:GO:0009737 | PFAM:PF00257 | ScanProsite:PS00315 | ScanProsite:PS00823 |
PANTHER:PTHR33346 | PANTHER:PTHR33346:SF9 | EnsemblPlantsGene:SORBI_3010G041900 | unigene:Sbi.15080 | UniParc:UPI0001A89005 | RefSeq:XP_002436495.1 |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:3242261..3244202
Molecular Weight (calculated)
37490.6 Da
IEP (calculated)
8.955
GRAVY (calculated)
-0.836
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHYEQQGRR QQVDEYGNPI PGGHAIQGRQ AGGYGAVAGT GSYDAGGYGS QQQQAGYGPT GTGMHDAGGY GGGQQAGYGA TGTGTHDAGG YGGSGHTGYG
101: ATGTGVHDAG GPGGYGARAH GTHGVTGIQD GAGGVGHTGG LHGATGMGTH GTGTGHGAHG ATGGIHDARV TGMHDTAGVL GGGGGGHTGS GMPGATGVGT
201: HGMGHGATGM TGTGGTATGA AFPHGAEHKT GGGILRRSGS SSSSSSSSED DGMGGRRKKG LKEKIKEKMP GGHKDNHGQQ ATATGAYGGT GYTGPTTGTG
301: TTGGGTYAPT TGGGTHEKKG VMEKIKEKIP GGHKDDYGQH HQHTSTGTGG GYGGTTGTYG TATTTTTEGT HEKKGFMEKI KEKLPGQH
101: ATGTGVHDAG GPGGYGARAH GTHGVTGIQD GAGGVGHTGG LHGATGMGTH GTGTGHGAHG ATGGIHDARV TGMHDTAGVL GGGGGGHTGS GMPGATGVGT
201: HGMGHGATGM TGTGGTATGA AFPHGAEHKT GGGILRRSGS SSSSSSSSED DGMGGRRKKG LKEKIKEKMP GGHKDNHGQQ ATATGAYGGT GYTGPTTGTG
301: TTGGGTYAPT TGGGTHEKKG VMEKIKEKIP GGHKDDYGQH HQHTSTGTGG GYGGTTGTYG TATTTTTEGT HEKKGFMEKI KEKLPGQH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.