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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES18117 Sorghum cytosol 24.23 61.84
Zm00001d010102_P001 Maize cytosol 45.1 54.18
Zm00001d010105_P001 Maize cytosol 44.85 53.87
Zm00001d045321_P001 Maize cytosol 45.1 53.68
Zm00001d010119_P001 Maize extracellular 44.33 52.92
Os11t0451700-00 Rice plastid 37.11 44.17
TraesCS4D01G063100.1 Wheat cytosol 36.34 32.79
TraesCS4A01G250900.1 Wheat cytosol 36.6 31.21
TraesCS4B01G064200.1 Wheat cytosol 36.08 30.63
Zm00001d010094_P001 Maize cytosol 25.77 29.41
Protein Annotations
MapMan:35.2EntrezGene:8071330UniProt:C5Z4B8InterPro:DehydrinInterPro:Dehydrin_CSEnsemblPlants:EER87862
ProteinID:EER87862ProteinID:EER87862.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0006950GO:GO:0008150GO:GO:0009414GO:GO:0009415GO:GO:0009628
GO:GO:0009631GO:GO:0009719GO:GO:0009737PFAM:PF00257ScanProsite:PS00315ScanProsite:PS00823
PANTHER:PTHR33346PANTHER:PTHR33346:SF9EnsemblPlantsGene:SORBI_3010G041900unigene:Sbi.15080UniParc:UPI0001A89005RefSeq:XP_002436495.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:+:3242261..3244202
Molecular Weight (calculated)
37490.6 Da
IEP (calculated)
8.955
GRAVY (calculated)
-0.836
Length
388 amino acids
Sequence
(BLAST)
001: MAHYEQQGRR QQVDEYGNPI PGGHAIQGRQ AGGYGAVAGT GSYDAGGYGS QQQQAGYGPT GTGMHDAGGY GGGQQAGYGA TGTGTHDAGG YGGSGHTGYG
101: ATGTGVHDAG GPGGYGARAH GTHGVTGIQD GAGGVGHTGG LHGATGMGTH GTGTGHGAHG ATGGIHDARV TGMHDTAGVL GGGGGGHTGS GMPGATGVGT
201: HGMGHGATGM TGTGGTATGA AFPHGAEHKT GGGILRRSGS SSSSSSSSED DGMGGRRKKG LKEKIKEKMP GGHKDNHGQQ ATATGAYGGT GYTGPTTGTG
301: TTGGGTYAPT TGGGTHEKKG VMEKIKEKIP GGHKDDYGQH HQHTSTGTGG GYGGTTGTYG TATTTTTEGT HEKKGFMEKI KEKLPGQH
Best Arabidopsis Sequence Match ( AT3G50980.1 )
(BLAST)
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.