Factsheet for HORVU6Hr1G063490.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G248000.1	Wheat	cytosol	89.34	100.0
TraesCS6B01G276700.1	Wheat	golgi, plastid	89.34	100.0
TraesCS6D01G230100.1	Wheat	cytosol	89.34	100.0
HORVU6Hr1G063540.1	Barley	plasma membrane	86.85	97.21
HORVU6Hr1G063560.1	Barley	cytosol	86.62	96.95
HORVU6Hr1G063570.1	Barley	cytosol	86.62	96.95
HORVU6Hr1G034650.1	Barley	plasma membrane	79.59	88.64

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0006730
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872
EnsemblPlantsGene:HORVU6Hr1G063490	EnsemblPlants:HORVU6Hr1G063490.2	UniProt:M0XNT1	HAMAP:MF_00086	PFAM:PF00438	PFAM:PF02772
PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF16
InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973
TIGRFAMs:TIGR01034	UniParc:UPI0002953D0F	SEG:seg	:	:	:

Description

S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:M0XNT1]

Coordinates

chrchr6H:+:427763656..427766022

Molecular Weight (calculated)

48568.9 Da

IEP (calculated)

6.157

GRAVY (calculated)

-0.213

Length

441 amino acids

Sequence
(BLAST)

001: MWSIVESLKM HIFRNRRSIS HEWHDLYVFD SNCRIFLYLQ SITSTKEMAA ETFLFTSESV NEGHPDKLCD QVSDAVLDAC LAQDADSKVA CETVTKTNMV
101: MVLGEITTKA TVDYEKIVRD TCRNIGFISD DVGLDADRCK VLVNIEQQSP DIAQGVHGHF TKRPEEVGAG DQGIMFGYAT DETPELMPLS HVLATKLGAR
201: LTEVRKNGTC AWVRPDGKTQ VTVEYLNEDG AMVPVRVHTV LISTQHDETV TNDEIAADLK EHVIKPVIPA KYLDENTIFH LNPSGRFVIG GPHGDAGLTG
301: RKIIIDTYGG WGAHGGGAFS GKDPTKVDRS GAYIARQAAK SIIASGLARR CIVQISYAIG VPEPLSVFVD SYGTGKIPDR EILKLVKENF DFRPGMISIN
401: LDLKKGGNRF IKTAAYGHFG RDDADFTWEV VKPLKFDKAS A

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.