Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 6
- mitochondrion 1
- golgi 4
- endoplasmic reticulum 3
- vacuole 3
- extracellular 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G467700.1 | Wheat | plasma membrane | 93.14 | 93.4 |
| TraesCS6D01G405200.1 | Wheat | plasma membrane | 92.59 | 92.98 |
| TraesCS6A01G420400.1 | Wheat | plasma membrane | 91.91 | 92.41 |
| Os02t0832100-00 | Rice | golgi, mitochondrion, plasma membrane, plastid | 44.72 | 73.42 |
| OQU86030 | Sorghum | plasma membrane | 41.02 | 60.04 |
| HORVU1Hr1G052040.1 | Barley | vacuole | 58.44 | 57.26 |
| HORVU4Hr1G082770.1 | Barley | cytosol, peroxisome, plasma membrane | 45.54 | 44.99 |
| HORVU4Hr1G030400.2 | Barley | extracellular, golgi, plasma membrane | 17.7 | 31.77 |
| HORVU1Hr1G051290.3 | Barley | peroxisome, plasma membrane | 18.52 | 26.89 |
| HORVU5Hr1G114020.2 | Barley | plastid | 19.2 | 24.43 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | EMBL:AK371659 | UniProt:F2E685 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009705 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| EnsemblPlantsGene:HORVU6Hr1G095020 | EnsemblPlants:HORVU6Hr1G095020.1 | InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf |
| PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 | ScanProsite:PS00217 | PFscan:PS50850 | PANTHER:PTHR23500 |
| PANTHER:PTHR23500:SF129 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS | TMHMM:TMhelix | UniParc:UPI0002007FD1 |
| SEG:seg | : | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E685]
Coordinates
chrchr6H:-:582642918..582645833
Molecular Weight (calculated)
76946.0 Da
IEP (calculated)
4.593
GRAVY (calculated)
0.399
Length
729 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGAALVALA AALGNMLQGW DNATIAGSLL YIKRDFGLDA QPALQGLVVA TSLIGATLIT TFSGPLSDHV GRRPMLVASS LLYALAGLLM LWSPTVGVLL
101: LARLVDGFAV GLAVTLVPVY ISETAPPEVR GLLSTLPQLT GSTGMFLSYC MVFAMTLAPS PNWRLMMGVL VLPSLLYVAV AVFFLPESPR WLVSKGRMKE
201: ARTVLRMLRG REDVDGEMAL LAEGLGTGGE TAIEEYIVGP APQDDDVDQA DATFRLYGPE RGMSWVAQPV PLGGQGSMLS SMGMSRQGSL LGSIAGLSRM
301: GSMLDHLQDP VVALLGGLHD MKPAADSNGN TLFTNFGSML SAHGGMDWDE ENAAPSDDDD KIAAGASEHD DVDDDGIRAP LLDMRGQSSM TGSGIGMGQT
401: TSTMGIGGGW QLAWKWTEGV APDGTRQNAV QRMYLHEEPS AGDGQHVHAA ALVNQSALYT ATNDHLQQQQ DDPITPMGPA MVHPASSPAA EKPRWRELLE
501: PGVRHALVCG VTIQILQQFS GISGILYYTP QILDQAGVSV LLASLGLSAD SAAILISGLT TLLMLPAIAV AMRLMDVAGR RSLLLWTIPV LIVSLVSLVT
601: ADVLPLAATV HAAVSTTSVI VYICTFVMGF GPIPGILCSE IFPTRVRGMC IAICSLAFWL SDIAVTYSMP VMLDSLGLAG VFSIYAAVCC VALAFVALRV
701: PETKGLPLEV IAEFFNVGAK GMPKLDHEE
101: LARLVDGFAV GLAVTLVPVY ISETAPPEVR GLLSTLPQLT GSTGMFLSYC MVFAMTLAPS PNWRLMMGVL VLPSLLYVAV AVFFLPESPR WLVSKGRMKE
201: ARTVLRMLRG REDVDGEMAL LAEGLGTGGE TAIEEYIVGP APQDDDVDQA DATFRLYGPE RGMSWVAQPV PLGGQGSMLS SMGMSRQGSL LGSIAGLSRM
301: GSMLDHLQDP VVALLGGLHD MKPAADSNGN TLFTNFGSML SAHGGMDWDE ENAAPSDDDD KIAAGASEHD DVDDDGIRAP LLDMRGQSSM TGSGIGMGQT
401: TSTMGIGGGW QLAWKWTEGV APDGTRQNAV QRMYLHEEPS AGDGQHVHAA ALVNQSALYT ATNDHLQQQQ DDPITPMGPA MVHPASSPAA EKPRWRELLE
501: PGVRHALVCG VTIQILQQFS GISGILYYTP QILDQAGVSV LLASLGLSAD SAAILISGLT TLLMLPAIAV AMRLMDVAGR RSLLLWTIPV LIVSLVSLVT
601: ADVLPLAATV HAAVSTTSVI VYICTFVMGF GPIPGILCSE IFPTRVRGMC IAICSLAFWL SDIAVTYSMP VMLDSLGLAG VFSIYAAVCC VALAFVALRV
701: PETKGLPLEV IAEFFNVGAK GMPKLDHEE
001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
Arabidopsis Description
TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.