Factsheet for HORVU1Hr1G052040.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
plasma membrane 8
endoplasmic reticulum 4
vacuole 4
golgi 5
extracellular 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

vacuole: 16581873
vacuole: 19142958
vacuole: 19391183

msms PMID: 19142958 doi

A Endler, S Reiland, B Gerrits, UG Schmidt, S Baginsky, E Martinoia

Institute of Plant Biology, University of Zurich, Zurich, Switzerland. aendler@botinst.uzh.ch

msms PMID: 16581873 doi

A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt

University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.

msms PMID: 19391183 doi

T Schneider, M Schellenberg, S Meyer, F Keller, P Gehrig, K Riedel, Y Lee, L Eberl, E Martinoia

Institute of Plant Biology, University of Zurich, Zollikerstrasse 107, Zurich, Switzerland. Thomas.Schneider@botinst.uzh.ch

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G215800.1	Wheat	golgi	98.66	98.79
TraesCS1D01G204900.1	Wheat	golgi, plasma membrane, vacuole	98.52	98.65
TraesCS1A01G201600.2	Wheat	plasma membrane	98.52	98.65
Os10t0539900-01	Rice	plasma membrane	90.05	90.54
EER94578	Sorghum	golgi, plasma membrane, vacuole	89.78	90.27
Zm00001d029762_P004	Maize	golgi, plasma membrane, vacuole	87.1	86.75
GSMUA_Achr4P25880_001	Banana	plasma membrane	72.58	76.7
GSMUA_Achr5P15870_001	Banana	plasma membrane	75.81	76.42
GSMUA_Achr1P02850_001	Banana	plasma membrane	64.78	76.27
GSMUA_AchrUn_...	Banana	plasma membrane	59.81	73.92
VIT_07s0031g02270.t01	Wine grape	plasma membrane	71.37	71.56
PGSC0003DMT400048038	Potato	plasma membrane	68.28	70.36
Solyc03g032040.2.1	Tomato	plasma membrane	68.28	70.07
Solyc02g082410.2.1	Tomato	plasma membrane	65.73	69.17
PGSC0003DMT400035507	Potato	endoplasmic reticulum, plasma membrane, vacuole	66.8	68.74
HORVU6Hr1G095020.1	Barley	golgi, plasma membrane	57.26	58.44
HORVU4Hr1G082770.1	Barley	cytosol, peroxisome, plasma membrane	51.61	52.03
HORVU4Hr1G030400.2	Barley	extracellular, golgi, plasma membrane	19.89	36.45
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	19.22	28.49
HORVU5Hr1G114020.2	Barley	plastid	19.62	25.48

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.4	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0008643	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
EnsemblPlantsGene:HORVU1Hr1G052040	EnsemblPlants:HORVU1Hr1G052040.1	InterPro:IPR020846	UniProt:M0WQP8	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF165	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TMHMM:TMhelix
UniParc:UPI000294C682	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:385752912..385757976

Molecular Weight (calculated)

79447.3 Da

IEP (calculated)

4.627

GRAVY (calculated)

0.421

Length

744 amino acids

Sequence
(BLAST)

001: MSSGAVLVAI AASIGNLLQG WDNATIAGAV LYIKKEFSLE TQPLIEGLIV AMSLIGATVI TTFSGAVADA VGRRPLLIAS SVLYFVSGLV MLWAPNVYVL
101: LLARLIDGFG IGLAVTLVPL YISETAPTDI RGLLNTLPQF SGSGGMFLSY CMVFTMSLMP QPDWRIMLGV LSIPSLMYFA LTVFYLPESP RWLVSKGRMA
201: EAKRVLQRLR GREDVSGEMA LLVEGLGVGK DTHFEEYIIG PDDELADDGL APDQEKLKLY GAEEGVSWIA RPVRGGGQSA LGSALGLMSR HGSMVSQGKS
301: LVDPLVTLFG SVHEKMPEVM GSMRSTLFPN FGSMFSVAEQ QQAKADWDAE SHRDDEDYAS DHGADDIEDN LNSPLISRQA TSVEGKEIAA PHGSIMGGVE
401: RSSSMQGGDA VSSMGIGGGW QLAWKWTERE GADGQKEGGF QRIYLHEEGV SGDRRGSILS MPGGDIPPGG EYIQAAALVS QPALYSKDLI EQQLAGPAMV
501: HPSEAVAKGT KWAELFEPGV KHALFVGIGL QILQQFAGIN GVLYYTPQIL EQAGVGILLS NIGLSSSSAS ILISALTTLL MLPSIGIAMR LMDMSGRRFL
601: LLSTIPVLIV ALAILVLVNV LDVGTMVHAA LSTISVIVYF CFFVMGFGPI PNILCAEIFP TSVRGICIAI CALTFWIGDI IVTYTLPVML NAIGLAGVFG
701: IYAVVCMIAF VFVYMKVPET KGMPLEVITE FFSVGAKQGK EATD

Best Arabidopsis Sequence Match ( AT4G35300.4 )
(BLAST)

001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE

Arabidopsis Description

TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.