Factsheet for HORVU4Hr1G030400.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, extracellular

Predictor Summary:

endoplasmic reticulum 3
plasma membrane 4
vacuole 3
golgi 4
extracellular 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G149600.1	Wheat	plasma membrane	65.02	66.67
Os11t0620400-01	Rice	plasma membrane	64.29	39.67
Zm00001d048823_P007	Maize	plasma membrane	61.33	38.19
EES08863	Sorghum	peroxisome, plastid	61.33	33.47
HORVU1Hr1G052040.1	Barley	vacuole	36.45	19.89
KRH07812	Soybean	plasma membrane	31.03	18.39
CDX78009	Canola	plasma membrane	30.3	18.39
KRH28946	Soybean	plasma membrane	32.27	18.14
CDX73717	Canola	plasma membrane	30.3	18.06
CDY33276	Canola	plasma membrane	29.56	17.96
CDY16303	Canola	plasma membrane	29.56	17.91
HORVU6Hr1G095020.1	Barley	golgi, plasma membrane	31.77	17.7
KRH76516	Soybean	plasma membrane	32.02	17.47
AT3G51490.2	Thale cress	plasma membrane	31.28	17.23
Bra038902.1-P	Field mustard	plasma membrane	30.54	16.92
Bra036794.1-P	Field mustard	plasma membrane	30.79	16.8
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	22.66	15.78
PGSC0003DMT400085968	Potato	cytosol, plasma membrane, vacuole	14.53	15.21
HORVU4Hr1G082770.1	Barley	cytosol, peroxisome, plasma membrane	27.09	14.91
CDY33275	Canola	extracellular, golgi, vacuole	3.94	13.45
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	13.3	10.76
HORVU5Hr1G114020.2	Barley	plastid	13.05	9.25

Protein Annotations

Gene3D:1.20.1250.20	MapMan:35.1	UniProt:A0A287NQ97	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
EnsemblPlantsGene:HORVU4Hr1G030400	EnsemblPlants:HORVU4Hr1G030400.2	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf
PFAM:PF00083	PANTHER:PTHR23500	PANTHER:PTHR23500:SF8	SUPFAM:SSF103473	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI000B478CFA	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:195123683..195157598

Molecular Weight (calculated)

45140.8 Da

IEP (calculated)

5.085

GRAVY (calculated)

-0.035

Length

406 amino acids

Sequence
(BLAST)

001: MLWSPNIYIL LLARLIAGSG SGLVFTCVPI YISETSSPDM RRSLGTMPHF MYIVGTIFSY CMLFWMTLVS SPNWRFMIGS VFAPSTLYFA LLVFYLRESP
101: RWLVRDGKIS QARVSLQWLR GKDDVSDRPA GEIALIVDGM NIIPGMDIGR HAISNAQGQS FLCTSTSQLS HYSSFYWHLS DPLVDLLGSI HENMSETGGA
201: QNNFVLAASS FNFTEHERVN GHVGEDVSVQ QIREAHPVDE GNNGDGLQAS LLSQAATAEG YDTNAPFTSE GSSSNLRRHG TTGLVQDFMA SLDDHVIEEE
301: EEEEEIHEAA LLSHRPTLHD VESTRRHLSS QHIVQLSEPA NIRPKWRVLL EPGVRHALCH GMLILLDMSL QESMASSATL LGFLNKLEWL VCFQTLDLAL
401: IQPQSS

Best Arabidopsis Sequence Match ( AT1G20840.1 )
(BLAST)

001: MKGATLVALA ATIGNFLQGW DNATIAGAMV YINKDLNLPT SVQGLVVAMS LIGATVITTC SGPISDWLGR RPMLILSSVM YFVCGLIMLW SPNVYVLCFA
101: RLLNGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV FYLPESPRWL VSKGRMDEAK
201: RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV
301: NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL
401: SMRRHSTLMQ GNGESSMGIG GGWHMGYRYE NDEYKRYYLK EDGAESRRGS IISIPGGPDG GGSYIHASAL VSRSVLGPKS VHGSAMVPPE KIAASGPLWS
501: ALLEPGVKRA LVVGVGIQIL QQFSGINGVL YYTPQILERA GVDILLSSLG LSSISASFLI SGLTTLLMLP AIVVAMRLMD VSGRRSLLLW TIPVLIVSLV
601: VLVISELIHI SKVVNAALST GCVVLYFCFF VMGYGPIPNI LCSEIFPTRV RGLCIAICAM VFWIGDIIVT YSLPVLLSSI GLVGVFSIYA AVCVISWIFV
701: YMKVPETKGM PLEVITDYFA FGAQAQASAP SKDI

Arabidopsis Description

MSSP1TMT1 [Source:UniProtKB/TrEMBL;Acc:A0A178W059]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.