Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- plasma membrane 6
- vacuole 4
- golgi 5
- extracellular 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G030400.2 | Barley | extracellular, golgi, plasma membrane | 66.67 | 65.02 |
| CDY33275 | Canola | extracellular, golgi, vacuole | 14.65 | 48.74 |
| Os11t0620400-01 | Rice | plasma membrane | 72.73 | 43.77 |
| Zm00001d048823_P007 | Maize | plasma membrane | 67.17 | 40.8 |
| EES08863 | Sorghum | peroxisome, plastid | 68.18 | 36.29 |
| TraesCS1B01G215800.1 | Wheat | golgi | 41.92 | 22.34 |
| CDY33276 | Canola | plasma membrane | 37.37 | 22.16 |
| TraesCS6B01G215800.1 | Wheat | plasma membrane | 41.41 | 22.04 |
| CDX78009 | Canola | plasma membrane | 37.12 | 21.97 |
| CDY16303 | Canola | plasma membrane | 37.12 | 21.94 |
| CDX73717 | Canola | plasma membrane | 37.12 | 21.59 |
| AT3G51490.2 | Thale cress | plasma membrane | 38.38 | 20.62 |
| Bra038902.1-P | Field mustard | plasma membrane | 38.13 | 20.6 |
| KRH07812 | Soybean | plasma membrane | 35.35 | 20.44 |
| TraesCS7B01G481200.1 | Wheat | plasma membrane | 38.38 | 20.11 |
| Bra036794.1-P | Field mustard | plasma membrane | 37.63 | 20.03 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 29.04 | 19.73 |
| TraesCS6B01G467700.1 | Wheat | plasma membrane | 34.6 | 18.84 |
| KRH28946 | Soybean | plasma membrane | 34.34 | 18.84 |
| KRH76516 | Soybean | plasma membrane | 35.35 | 18.82 |
| TraesCS4B01G322000.2 | Wheat | cytosol, peroxisome, plasma membrane | 31.06 | 16.62 |
| TraesCS1B01G211800.1 | Wheat | plasma membrane | 17.17 | 13.74 |
| TraesCS5B01G498000.2 | Wheat | mitochondrion, plastid | 16.67 | 11.68 |
| PGSC0003DMT400085968 | Potato | cytosol, plasma membrane, vacuole | 9.6 | 9.79 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PFscan:PS50850 | PANTHER:PTHR23500 |
| PANTHER:PTHR23500:SF8 | SUPFAM:SSF103473 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G149600 | EnsemblPlants:TraesCS4B01G149600.1 | TIGR:cd06174 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:222603782..222615097
Molecular Weight (calculated)
43738.5 Da
IEP (calculated)
4.436
GRAVY (calculated)
0.194
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSIVFSAVA VSIGYVLLGW DFTRVLEANL HMKEFDLENG PLIEGIIVAV SIFGAIVITI FSGSLLDWLG RRVVLIHSSL LLFSGGVLML WSPNIYILLI
101: ARIIVGSGSG LVFTCVPIYI SETSSPYMPG SLETMPQFMF IVGIIFSYCM IFWMTLVSSR NWRCMIGSIF APSTLYFALL VFYLPESPRW LVSDGKLGQA
201: RVSLQWLRGK DDVSDRPAGE IALIADGMNI IPGMDIGRHA ISNAQGQSFL PTSTGQLSRY SSWYWHLSDP LVDLLGSIHE NMSEAVGVRN NFFPAFSSFN
301: FMEDERVNGH VGEDVSAQQI REARPTNEGN NGDGLQAYLL SQAATAEGYD TNAPFTSEGS SSYLRRHGTT GLVQDFMASL DDHEIEEEEE EEGSMK
101: ARIIVGSGSG LVFTCVPIYI SETSSPYMPG SLETMPQFMF IVGIIFSYCM IFWMTLVSSR NWRCMIGSIF APSTLYFALL VFYLPESPRW LVSDGKLGQA
201: RVSLQWLRGK DDVSDRPAGE IALIADGMNI IPGMDIGRHA ISNAQGQSFL PTSTGQLSRY SSWYWHLSDP LVDLLGSIHE NMSEAVGVRN NFFPAFSSFN
301: FMEDERVNGH VGEDVSAQQI REARPTNEGN NGDGLQAYLL SQAATAEGYD TNAPFTSEGS SSYLRRHGTT GLVQDFMASL DDHEIEEEEE EEGSMK
001: MKGATLVALA ATIGNFLQGW DNATIAGAMV YINKDLNLPT SVQGLVVAMS LIGATVITTC SGPISDWLGR RPMLILSSVM YFVCGLIMLW SPNVYVLCFA
101: RLLNGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV FYLPESPRWL VSKGRMDEAK
201: RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV
301: NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL
401: SMRRHSTLMQ GNGESSMGIG GGWHMGYRYE NDEYKRYYLK EDGAESRRGS IISIPGGPDG GGSYIHASAL VSRSVLGPKS VHGSAMVPPE KIAASGPLWS
501: ALLEPGVKRA LVVGVGIQIL QQFSGINGVL YYTPQILERA GVDILLSSLG LSSISASFLI SGLTTLLMLP AIVVAMRLMD VSGRRSLLLW TIPVLIVSLV
601: VLVISELIHI SKVVNAALST GCVVLYFCFF VMGYGPIPNI LCSEIFPTRV RGLCIAICAM VFWIGDIIVT YSLPVLLSSI GLVGVFSIYA AVCVISWIFV
701: YMKVPETKGM PLEVITDYFA FGAQAQASAP SKDI
101: RLLNGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV FYLPESPRWL VSKGRMDEAK
201: RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV
301: NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL
401: SMRRHSTLMQ GNGESSMGIG GGWHMGYRYE NDEYKRYYLK EDGAESRRGS IISIPGGPDG GGSYIHASAL VSRSVLGPKS VHGSAMVPPE KIAASGPLWS
501: ALLEPGVKRA LVVGVGIQIL QQFSGINGVL YYTPQILERA GVDILLSSLG LSSISASFLI SGLTTLLMLP AIVVAMRLMD VSGRRSLLLW TIPVLIVSLV
601: VLVISELIHI SKVVNAALST GCVVLYFCFF VMGYGPIPNI LCSEIFPTRV RGLCIAICAM VFWIGDIIVT YSLPVLLSSI GLVGVFSIYA AVCVISWIFV
701: YMKVPETKGM PLEVITDYFA FGAQAQASAP SKDI
Arabidopsis Description
MSSP1TMT1 [Source:UniProtKB/TrEMBL;Acc:A0A178W059]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.