CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
mitochondrion 1
peroxisome 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048823_P007	Maize	plasma membrane	81.18	92.64
Os11t0620400-01	Rice	plasma membrane	63.58	71.88
TraesCS4B01G149600.1	Wheat	plasma membrane	36.29	68.18
HORVU4Hr1G030400.2	Barley	extracellular, golgi, plasma membrane	33.47	61.33
CDY33275	Canola	extracellular, golgi, vacuole	7.12	44.54
EER94578	Sorghum	golgi, plasma membrane, vacuole	36.83	37.03
KXG29850	Sorghum	plasma membrane	36.96	36.91
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	28.63	36.54
CDX78009	Canola	plasma membrane	32.26	35.87
CDY33276	Canola	plasma membrane	32.12	35.78
CDY16303	Canola	plasma membrane	31.99	35.52
CDX73717	Canola	plasma membrane	32.26	35.24
EER90435	Sorghum	plasma membrane	36.29	35.2
AT3G51490.2	Thale cress	plasma membrane	34.01	34.33
KRH07812	Soybean	plasma membrane	31.05	33.72
Bra038902.1-P	Field mustard	plasma membrane	32.8	33.29
Bra036794.1-P	Field mustard	plasma membrane	32.39	32.39
KRH28946	Soybean	plasma membrane	31.05	31.99
KRH76516	Soybean	plasma membrane	31.05	31.05
OQU86030	Sorghum	plasma membrane	20.43	30.52
PGSC0003DMT400085968	Potato	cytosol, plasma membrane, vacuole	14.52	27.84
EER91860	Sorghum	plasma membrane	16.4	23.87
EER90617	Sorghum	plastid	14.78	19.47

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.4	UniProt:C5Y6H3	EnsemblPlants:EES08863	ProteinID:EES08863	ProteinID:EES08863.2
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0008643
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0022891	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF8	EnsemblPlantsGene:SORBI_3005G191900	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TMHMM:TMhelix	UniParc:UPI00081AD127	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:67550181..67557281

Molecular Weight (calculated)

81187.9 Da

IEP (calculated)

7.498

GRAVY (calculated)

0.314

Length

744 amino acids

Sequence
(BLAST)

001: MLSSPSQSQR RSGSVLSADL LLLSPLAARS QGSDLPRVGG SPSAASSDGG AVPGSRRRRR LPPPSLASRL APSPASSAHR PTTLRFIIVC KRAIVLDEMK
101: STVFSAVVVS IGYAMLGWDF AALLEANHHM KKEFELLNGP SIEGITLAAS TFGAIVITIF SGALLDWLGR RAILVYSSLV LFSGGVLMLW SPNIYIVLLA
201: RLIVGSGSGL VFTCVPIYIS ETSPPNMRGL LGTMPQFMFF IGTIFSYCLI FWLTLMSSPN WRIMIGAIFA PSIVYFALLV YYLPESPRWL ASDGKISEAR
301: VSLQRLRGKK HDVSGEIAVI VDGVDIISDS AVGTARAQSF SGTSASRTWP RSTFYWQLSD PLVDLLGSIH ENMSEGGSRR NSFFPVFNSF SFPEHEHMNE
401: HRDGNSDQQT REAYSAGEVN NGDGLRASLL SQAASVEVND ANTSFTSEGS SSYLRRHGTS VLAQEFMASI HDHDIEEEEE IHGFVLPHQS APRDMESRGR
501: HQVVRLSETA DMKFKWRVLL QPGIRHALCY GMLIQALQQS TGISGLLRCA PEILEQVGVS LFSDIGLSPH STSILISTLQ ALLILPCITA AMLLMDVCGR
601: RVLVLATTPI LILSLSVMSM SILFNMGPFD RAIVFHFALT VCFCSYVIGL GPIPNILCSE IFPTKARATC ASFCSLSFWF GGLLSAYCLP VMMSTIGLGG
701: ACGIYALVCC APLFLFYYRI PETKMLNLEL IAELFKLSRQ EYVQ

Best Arabidopsis Sequence Match ( AT3G51490.1 )
(BLAST)

001: MRSVVLVALA AAIGNMLQGW DNATIAGAVI YIKKEFHLEK EPKIEGLIVA MSLIGATLIT TFSGPVSDKV GRRSMLILSS VLYFLSSIVM FWSPNVYVLL
101: FARLLDGFGI GLAVTLVPIY ISETAPSEIR GLLNTFPQFC GSGGMFLSYC LVFGMSLQES PSWRLMLGVL SIPSIAYFVL AAFFLPESPR WLVSKGRMDE
201: ARQVLQRLRG REDVSGELAL LVEGLGVGKD TSIEEYVIGP DNEENEGGNE LPRKDQIKLY GPEDGQSWMA KPVKGQSSLA LASRQGSMLP RGGSLMDPLV
301: TLFGSIHENL PSENMNASSR SMLFPNMGSI LGMMGRQESQ WDPERNNEDS SDQDENLNSP LLSPQTTEPD DYHQRTVGTM HRRQSSLFMA NVGETATATS
401: IGGGWQLAWK YNDKVGADGK RVNGGLQRMY IHEETANNNT NNIPFSRRGS LLSFHPEGDG HDQVNGYVQA AALVSQASMM PGGKGETAML PKEVKDGPGW
501: RELKEPGVKR ALMVGVGLQI LQQFAGINGV MYYTPQILEE TGVSSLLTNL GISAESASLL ISALTTLLML PCILVSMRSL MLSTIPILIL SLVTLVIGSL
601: VNLGGSINAL ISTASVTVYL SCFVMGFGAI PNILCSEIFP TSVRGLCITI CALTFWICDI IVTYTLPVML KSIGIAGVFG IYAIVCAVAW VFVYLKVPET
701: KGMPLEVISE FFSVGAKQQD AAASFLSDG

Arabidopsis Description

TMT3Tonoplast monosaccharide transporter3 [Source:UniProtKB/TrEMBL;Acc:F4J4E8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.