CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
endoplasmic reticulum 1
vacuole 1
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014435_P004	Maize	plasma membrane	97.06	91.51
Os10t0579200-01	Rice	plasma membrane	84.54	86.06
TraesCS1D01G200700.1	Wheat	plasma membrane	83.17	85.86
TraesCS1B01G211800.1	Wheat	plasma membrane	83.17	85.86
TraesCS1A01G197200.1	Wheat	plasma membrane	82.97	85.66
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	82.78	84.26
GSMUA_Achr11P...	Banana	plasma membrane	74.56	76.51
VIT_16s0039g02170.t01	Wine grape	plasma membrane	67.71	69.2
KRH29016	Soybean	plasma membrane	66.93	68.26
KRH24040	Soybean	plasma membrane	65.75	67.61
Solyc03g096950.2.1	Tomato	plasma membrane	65.36	66.4
PGSC0003DMT400001526	Potato	plasma membrane	65.36	66.4
AT5G17010.4	Thale cress	plasma membrane	64.97	66.0
CDX85478	Canola	plasma membrane	64.77	65.54
CDY38076	Canola	cytosol, plasma membrane, vacuole	63.8	64.94
CDY28736	Canola	cytosol, plasma membrane, vacuole	62.04	63.02
Bra032018.1-P	Field mustard	plasma membrane	62.04	62.9
AT3G03090.1	Thale cress	plasma membrane	61.84	62.82
CDY43152	Canola	cytosol, plasma membrane, vacuole	61.64	62.5
Bra021374.1-P	Field mustard	plasma membrane	61.06	62.03
CDY23466	Canola	plasma membrane	61.06	62.03
CDY49922	Canola	plasma membrane	60.86	61.83
Bra023592.1-P	Field mustard	cytosol, plasma membrane, vacuole	64.58	61.45
CDX92030	Canola	plasma membrane	60.27	61.35
CDX74227	Canola	cytosol, plasma membrane, vacuole	57.93	61.28
Bra001072.1-P	Field mustard	plasma membrane	43.84	59.73
CDX92028	Canola	cytosol, mitochondrion, peroxisome, vacuole	54.4	57.92
EER90617	Sorghum	plastid	57.34	51.86
CDY47336	Canola	golgi, plasma membrane	23.29	45.59
EER94578	Sorghum	golgi, plasma membrane, vacuole	28.96	20.0
KXG29850	Sorghum	plasma membrane	27.98	19.19
EER90435	Sorghum	plasma membrane	27.01	17.99
OQU86030	Sorghum	plasma membrane	16.24	16.67
EES08863	Sorghum	peroxisome, plastid	23.87	16.4

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.2	EntrezGene:8055121	UniProt:C5WQN1	EnsemblPlants:EER91860	ProteinID:EER91860
ProteinID:EER91860.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	EnsemblPlantsGene:SORBI_3001G282600	SUPFAM:SSF103473
unigene:Sbi.12986	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0001A82385
RefSeq:XP_002464862.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:55464135..55468654

Molecular Weight (calculated)

54808.3 Da

IEP (calculated)

5.079

GRAVY (calculated)

0.617

Length

511 amino acids

Sequence
(BLAST)

001: MASHPPPEDK EQSEHEEIHV SSGGVQAYTD DDDCENRRPL LLRAPASAEC YSISAAVFPF FFPALGGLLY GYDIGATSGA TISLKSSTFS GTTWYNLSSV
101: QTGLVVSGSL YGALIGSVLA YTIADFLGRR KELILASISY LIGALLTAVA PNFAIMVVGR FLYGIGIGLA MHAAPMYIAE TAPSQIRGML ISLKEFFIVL
201: GMLLGYIAGN LYVEVVSGWR YMYVSSTPLC LIMGVGMCWL PSSPRWLLLC AIQGKGNLPD TKENATRCLC RLRGQASPDL VSEQIDLILE ELSYIDQEKQ
301: ASFGEIFQGK CLKAMIIGCG LVFFQQVTGQ PSVLYYAATI FQSAGFSGAS DATRVSILLG VLKLIMTGVA VLVVDRLGRR PLLIGGVSGI TVALFLLSSY
401: YTLLKDASYV AVIALLLYVG CYQLSFGPIG WLMISEVFPL RLRGRGLGVA VLVNFASNAL VTFAFSPLED LIGTGALFSG FGVIAVASLA FIFWIVPETK
501: GLTLEEIEAS L

Best Arabidopsis Sequence Match ( AT5G17010.4 )
(BLAST)

001: MALDPEQQQP ISSVSREFGK SSGEISPERE PLIKENHVPE NYSVVAAILP FLFPALGGLL YGYEIGATSC ATISLQSPSL SGISWYNLSS VDVGLVTSGS
101: LYGALFGSIV AFTIADVIGR RKELILAALL YLVGALVTAL APTYSVLIIG RVIYGVSVGL AMHAAPMYIA ETAPSPIRGQ LVSLKEFFIV LGMVGGYGIG
201: SLTVNVHSGW RYMYATSVPL AVIMGIGMWW LPASPRWLLL RVIQGKGNVE NQREAAIKSL CCLRGPAFVD SAAEQVNEIL AELTFVGEDK EVTFGELFQG
301: KCLKALIIGG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA GDATRVSILL GLLKLIMTGV AVVVIDRLGR RPLLLGGVGG MVVSLFLLGS YYLFFSASPV
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGLSL AVLVNFGANA LVTFAFSPLK ELLGAGILFC GFGVICVLSL VFIFFIVPET KGLTLEEIEA
501: KCL

Arabidopsis Description

D-xylose-proton symporter-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.