CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
endoplasmic reticulum 1
plasma membrane 2
vacuole 2
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85478	Canola	plasma membrane	98.41	97.82
Bra023592.1-P	Field mustard	cytosol, plasma membrane, vacuole	98.41	91.99
AT5G17010.4	Thale cress	plasma membrane	91.24	91.05
CDY28736	Canola	cytosol, plasma membrane, vacuole	80.28	80.12
CDY43152	Canola	cytosol, plasma membrane, vacuole	79.48	79.17
CDY23466	Canola	plasma membrane	77.89	77.73
CDY49922	Canola	plasma membrane	77.69	77.53
CDX92030	Canola	plasma membrane	76.49	76.49
CDX74227	Canola	cytosol, plasma membrane, vacuole	73.31	76.19
KRH29016	Soybean	plasma membrane	73.9	74.05
KRH24040	Soybean	plasma membrane	72.91	73.64
CDX92028	Canola	cytosol, mitochondrion, peroxisome, vacuole	70.12	73.33
VIT_16s0039g02170.t01	Wine grape	plasma membrane	72.51	72.8
PGSC0003DMT400001526	Potato	plasma membrane	70.32	70.18
GSMUA_Achr11P...	Banana	plasma membrane	69.32	69.88
Solyc03g096950.2.1	Tomato	plasma membrane	69.52	69.38
TraesCS1A01G197200.1	Wheat	plasma membrane	66.73	67.68
TraesCS1D01G200700.1	Wheat	plasma membrane	66.73	67.68
TraesCS1B01G211800.1	Wheat	plasma membrane	66.53	67.47
Os10t0579200-01	Rice	plasma membrane	67.13	67.13
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	66.33	66.33
EER91860	Sorghum	plasma membrane	64.94	63.8
Zm00001d014435_P004	Maize	plasma membrane	65.54	60.7
CDY47336	Canola	golgi, plasma membrane	28.88	55.56
CDY33006	Canola	plastid	58.96	53.33
CDY54245	Canola	plastid	59.36	53.31
CDY33275	Canola	extracellular, golgi, vacuole	6.37	26.89
CDY31497	Canola	plasma membrane	27.89	22.15
CDY65623	Canola	plasma membrane	28.69	21.33
CDY29502	Canola	plasma membrane	27.89	21.24
CDX69128	Canola	plasma membrane	28.69	21.08
CDY33650	Canola	plasma membrane	27.69	19.94
CDX75492	Canola	plasma membrane	28.88	19.59
CDX96618	Canola	plasma membrane	27.69	19.17
CDY33276	Canola	plasma membrane	24.9	18.71
CDX78009	Canola	plasma membrane	24.7	18.54
CDY16303	Canola	plasma membrane	24.7	18.51
CDX73717	Canola	plasma membrane	24.9	18.36

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.2	GO:A0A078HKD2	UniProt:A0A078HKD2	EnsemblPlants:CDY38076	ProteinID:CDY38076
ProteinID:CDY38076.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00065343001	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0004EBE3EE	SEG:seg	:	:

Description

BnaC02g06970DBnaC02g06970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKD2]

Coordinates

chrLK032416:+:1019..5356

Molecular Weight (calculated)

53448.2 Da

IEP (calculated)

7.745

GRAVY (calculated)

0.719

Length

502 amino acids

Sequence
(BLAST)

001: MAFDPEQQPT SSAFVEVGKT SGEIRSEREP LIKDNHTPEN YSVVSAIFPF LFPALGGLLY GYEIGATSCA TISLQSPSLS GISWYNLSSL DVGLVTSGSL
101: YGALVGSAVA FSIADVIGRR KELVLAALFF LVGGLATTLA PIYSVLIIGR VTYGVGVGLA MHAAPMYIAE TAPSQIRGQL VSLKEFFIVL GMVGGYGIGS
201: LTVNTLSGWR YMYATSVPLA VVMGIGMWWL PASPRWLLLR VIQGKGNVEN QKEAAIKSLC RLRGSAFVDS AAEQVNEILA ELSFVGEDKE ATFGELFQGK
301: CKKALIIGGG LVLFQQITGQ PSVLYYAPSI LQTAGFSAAG DATRVSILLG LLKLIMTGVA VVVIDRLGRR PLLLGGVGGM VVSLFLLGSY YIFFSAAPVV
401: AVVALLLYVG CYQLSFGPIG WLMISEIFPL KLRGRGLSLA VLLNFSANAL VTFAFSPLKE LFGAGILFMG FGVICVLSLL FIYFIVPETK GLTLEEIEAK
501: CL

Best Arabidopsis Sequence Match ( AT5G17010.4 )
(BLAST)

001: MALDPEQQQP ISSVSREFGK SSGEISPERE PLIKENHVPE NYSVVAAILP FLFPALGGLL YGYEIGATSC ATISLQSPSL SGISWYNLSS VDVGLVTSGS
101: LYGALFGSIV AFTIADVIGR RKELILAALL YLVGALVTAL APTYSVLIIG RVIYGVSVGL AMHAAPMYIA ETAPSPIRGQ LVSLKEFFIV LGMVGGYGIG
201: SLTVNVHSGW RYMYATSVPL AVIMGIGMWW LPASPRWLLL RVIQGKGNVE NQREAAIKSL CCLRGPAFVD SAAEQVNEIL AELTFVGEDK EVTFGELFQG
301: KCLKALIIGG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA GDATRVSILL GLLKLIMTGV AVVVIDRLGR RPLLLGGVGG MVVSLFLLGS YYLFFSASPV
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGLSL AVLVNFGANA LVTFAFSPLK ELLGAGILFC GFGVICVLSL VFIFFIVPET KGLTLEEIEA
501: KCL

Arabidopsis Description

D-xylose-proton symporter-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.