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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 5
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
  • extracellular 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33275 Canola extracellular, golgi, vacuole 17.46 98.32
CDY33276 Canola plasma membrane 97.91 98.2
Bra038902.1-P Field mustard plasma membrane 98.06 89.63
CDX78009 Canola plasma membrane 88.06 88.19
CDX73717 Canola plasma membrane 89.55 88.11
AT3G51490.2 Thale cress plasma membrane 91.79 83.45
CDY65623 Canola plasma membrane 63.28 62.81
CDX69128 Canola plasma membrane 62.69 61.49
CDX75492 Canola plasma membrane 64.33 58.24
CDY31497 Canola plasma membrane 53.73 56.96
CDY29502 Canola plasma membrane 55.82 56.75
CDY33650 Canola plasma membrane 55.07 52.94
CDX96618 Canola plasma membrane 56.72 52.41
KRH07812 Soybean plasma membrane 51.34 50.22
GSMUA_AchrUn_... Banana golgi, plasma membrane 42.84 49.23
PGSC0003DMT400085968 Potato cytosol, plasma membrane, vacuole 28.36 48.97
KRH28946 Soybean plasma membrane 52.69 48.89
KRH76516 Soybean plasma membrane 52.84 47.58
TraesCS4D01G318500.1 Wheat cytosol, peroxisome, plasma membrane 50.0 45.27
TraesCS4B01G322000.2 Wheat cytosol, peroxisome, plasma membrane 49.85 45.14
TraesCS5A01G490000.1 Wheat cytosol, peroxisome, plasma membrane 49.7 44.94
HORVU4Hr1G082770.1 Barley cytosol, peroxisome, plasma membrane 49.25 44.72
Os03t0128932-00 Rice nucleus 26.27 40.74
Os11t0620400-01 Rice plasma membrane 37.76 38.45
TraesCS4B01G149600.1 Wheat plasma membrane 21.94 37.12
Zm00001d048823_P007 Maize plasma membrane 35.07 36.04
EES08863 Sorghum peroxisome, plastid 35.52 31.99
HORVU4Hr1G030400.2 Barley extracellular, golgi, plasma membrane 17.91 29.56
CDY28736 Canola cytosol, plasma membrane, vacuole 20.3 27.04
CDY43152 Canola cytosol, plasma membrane, vacuole 20.15 26.79
CDX92030 Canola plasma membrane 19.4 25.9
CDY23466 Canola plasma membrane 19.4 25.84
CDY33006 Canola plastid 21.34 25.77
CDX74227 Canola cytosol, plasma membrane, vacuole 18.51 25.67
CDY49922 Canola plasma membrane 19.25 25.65
CDY54245 Canola plastid 21.19 25.4
CDY38076 Canola cytosol, plasma membrane, vacuole 18.51 24.7
CDX92028 Canola cytosol, mitochondrion, peroxisome, vacuole 17.61 24.58
CDX85478 Canola plasma membrane 18.51 24.55
CDY47336 Canola golgi, plasma membrane 8.51 21.84
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.4GO:A0A078FV71UniProt:A0A078FV71EnsemblPlants:CDY16303ProteinID:CDY16303
ProteinID:CDY16303.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00090806001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216
ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF8SUPFAM:SSF103473InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CSTMHMM:TMhelixUniParc:UPI0004EDD8BCSEG:seg::
Description
BnaC01g23380DBnaC01g23380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV71]
Coordinates
chrLK032062:+:541615..544377
Molecular Weight (calculated)
73134.3 Da
IEP (calculated)
4.654
GRAVY (calculated)
0.271
Length
670 amino acids
Sequence
(BLAST)
001: MRSVVLVALT AAIGNMLQGW DNATIAGAVI YIKKEFHLEK EPKIEGLIVA MSLIGATMIT TFSGPVSDRV GRRSMLILSS LLYFLSSIVM FWSPNVYVLL
101: FARLLDGFGI GLAVTLVPIY ISETAPSEIR GLLNTFPQFC GSGGMFLSYC LVFGMSLQES PSWRLMLGVL SIPSILYFVL AAFFLPESPR WLVSKGRMEE
201: ARQVLQRLRD REDVSGELAL LVEGLGVGKD TLIEEYVIGP DDDEETETGQ ELPRKDQIKL YGPEDGQSWM AKPVKGQSSL ALASRHGSML TRGGSMMDPV
301: VTLFGSIHEK LPSENMNASS SRSMVFPNMG SILGLMGRQE SQWDPERNND DSSDQDESLN SPLLSPQATE TDDIGGGWQL AWKYNEKVGA DGKRVNGGLQ
401: RMYIHEETSN NNNAKNMGFS RRGSLLSFQT EADIKAGPDW RELKEPGVKR ALIVGVGLQI LQQFAGINGV MYYTPQILEE TGVSSLLTNL GISEESASLL
501: ISSLTTLFML PCILVSMRSL MLSTIPILIL SLITLVIGSL VKLEGTANAL ISTASVMVYL SCFVMGFGAI PNILCSEIFP TSVRGLCITI CALTFWICDI
601: IVTYTLPVML KSLGLAGVFG IYAFVCAVAW VFVYLKVPET KGMPLEVISE FFSVGAKHQD ASASFLSDDD
Best Arabidopsis Sequence Match ( AT3G51490.1 )
(BLAST)
001: MRSVVLVALA AAIGNMLQGW DNATIAGAVI YIKKEFHLEK EPKIEGLIVA MSLIGATLIT TFSGPVSDKV GRRSMLILSS VLYFLSSIVM FWSPNVYVLL
101: FARLLDGFGI GLAVTLVPIY ISETAPSEIR GLLNTFPQFC GSGGMFLSYC LVFGMSLQES PSWRLMLGVL SIPSIAYFVL AAFFLPESPR WLVSKGRMDE
201: ARQVLQRLRG REDVSGELAL LVEGLGVGKD TSIEEYVIGP DNEENEGGNE LPRKDQIKLY GPEDGQSWMA KPVKGQSSLA LASRQGSMLP RGGSLMDPLV
301: TLFGSIHENL PSENMNASSR SMLFPNMGSI LGMMGRQESQ WDPERNNEDS SDQDENLNSP LLSPQTTEPD DYHQRTVGTM HRRQSSLFMA NVGETATATS
401: IGGGWQLAWK YNDKVGADGK RVNGGLQRMY IHEETANNNT NNIPFSRRGS LLSFHPEGDG HDQVNGYVQA AALVSQASMM PGGKGETAML PKEVKDGPGW
501: RELKEPGVKR ALMVGVGLQI LQQFAGINGV MYYTPQILEE TGVSSLLTNL GISAESASLL ISALTTLLML PCILVSMRSL MLSTIPILIL SLVTLVIGSL
601: VNLGGSINAL ISTASVTVYL SCFVMGFGAI PNILCSEIFP TSVRGLCITI CALTFWICDI IVTYTLPVML KSIGIAGVFG IYAIVCAVAW VFVYLKVPET
701: KGMPLEVISE FFSVGAKQQD AAASFLSDG
Arabidopsis Description
TMT3Tonoplast monosaccharide transporter3 [Source:UniProtKB/TrEMBL;Acc:F4J4E8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.