Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G318500.1 | Wheat | cytosol, peroxisome, plasma membrane | 94.44 | 94.19 |
| TraesCS4B01G322000.2 | Wheat | cytosol, peroxisome, plasma membrane | 94.04 | 93.78 |
| TraesCS5A01G490000.1 | Wheat | cytosol, peroxisome, plasma membrane | 93.22 | 92.85 |
| CDY33275 | Canola | extracellular, golgi, vacuole | 10.03 | 62.18 |
| HORVU1Hr1G052040.1 | Barley | vacuole | 52.03 | 51.61 |
| CDX78009 | Canola | plasma membrane | 45.53 | 50.22 |
| CDX73717 | Canola | plasma membrane | 45.53 | 49.34 |
| CDY16303 | Canola | plasma membrane | 44.72 | 49.25 |
| CDY33276 | Canola | plasma membrane | 44.58 | 49.25 |
| AT3G51490.2 | Thale cress | plasma membrane | 47.97 | 48.03 |
| Bra038902.1-P | Field mustard | plasma membrane | 45.53 | 45.84 |
| HORVU6Hr1G095020.1 | Barley | golgi, plasma membrane | 44.99 | 45.54 |
| Bra036794.1-P | Field mustard | plasma membrane | 45.66 | 45.3 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 35.5 | 44.94 |
| KRH07812 | Soybean | plasma membrane | 41.46 | 44.67 |
| Os03t0128932-00 | Rice | nucleus | 25.88 | 44.21 |
| KRH28946 | Soybean | plasma membrane | 40.65 | 41.55 |
| PGSC0003DMT400085968 | Potato | cytosol, plasma membrane, vacuole | 21.41 | 40.72 |
| KRH76516 | Soybean | plasma membrane | 40.51 | 40.19 |
| HORVU4Hr1G030400.2 | Barley | extracellular, golgi, plasma membrane | 14.91 | 27.09 |
| HORVU1Hr1G051290.3 | Barley | peroxisome, plasma membrane | 17.21 | 25.3 |
| HORVU5Hr1G114020.2 | Barley | plastid | 17.89 | 23.04 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | UniProt:A0A287PVU3 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| EnsemblPlantsGene:HORVU4Hr1G082770 | EnsemblPlants:HORVU4Hr1G082770.1 | InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf |
| PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00217 | PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF344 |
| SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS | TMHMM:TMhelix | UniParc:UPI000B46C877 | SEG:seg |
Description
No Description!
Coordinates
chrchr4H:-:623189185..623193457
Molecular Weight (calculated)
81591.6 Da
IEP (calculated)
5.399
GRAVY (calculated)
0.318
Length
738 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLTCPLVR DSEANLHAKL APSGPGSGLQ QACKKLRDWM TVDRAVLVAF MASIGNLLQG WDNASIAGAM FYIKEEFKLD SMPMIEGCIM AMALFGATII
101: TTLSGMLSDK FGRWMMLLTS AVLSFVSALL VIFWSQHVYM LLSARLIQGF SIGLAVTLVP LYIVETAPSD MRGKLSTFPQ LSGSVGMFLS YCMVFWMSML
201: PKVSWRIMLG IQLIPSLIYS MLIIFYLPET PSWLVSQGRV DEAKKVLQKL RKKEDVSGEM ASLLEGTKVG DTPSMEEYLI STNENMLREK LIGNDEIIKL
301: YGLPEDLHCV AYPLKRTNTE ESGIGRPISR GASFYDPLVN IIGSMHGLPE VAHGIFNELE QQGPIEADEE NQEETKEHEL EQNIDDLYDG EHDYLIQPKP
401: TNINDLVVCR KSGHIGGGWQ LAWKMSSGYR PNGQMEGGME RVYLHEGGVP SSENLLDAQI DGNFIQATAL VNKSVFHKSG HNIGIHSPNQ DYRSTTWKDL
501: LEPGVKRALV VGVGIQVLQQ FAGINGILYY TPQILEQAGV GVLLSKFGIS SSSVSILMSA LTTLLMLPFI CIAMWLMDRT GRRRILLVTI PILVVSLVVL
601: VTVNIVNLSA ELHALLSTMS VGIYFCIFVM GFGPIPNIFC SEIFPNKVRA ICLAICSLIF WICDIIVTYT LPVLLRYIGL AGVFGVYAIV CVLAFIFVCL
701: KVPETKNIPI EVIAEFYALG GSGTQIIQEK QKENSEKL
101: TTLSGMLSDK FGRWMMLLTS AVLSFVSALL VIFWSQHVYM LLSARLIQGF SIGLAVTLVP LYIVETAPSD MRGKLSTFPQ LSGSVGMFLS YCMVFWMSML
201: PKVSWRIMLG IQLIPSLIYS MLIIFYLPET PSWLVSQGRV DEAKKVLQKL RKKEDVSGEM ASLLEGTKVG DTPSMEEYLI STNENMLREK LIGNDEIIKL
301: YGLPEDLHCV AYPLKRTNTE ESGIGRPISR GASFYDPLVN IIGSMHGLPE VAHGIFNELE QQGPIEADEE NQEETKEHEL EQNIDDLYDG EHDYLIQPKP
401: TNINDLVVCR KSGHIGGGWQ LAWKMSSGYR PNGQMEGGME RVYLHEGGVP SSENLLDAQI DGNFIQATAL VNKSVFHKSG HNIGIHSPNQ DYRSTTWKDL
501: LEPGVKRALV VGVGIQVLQQ FAGINGILYY TPQILEQAGV GVLLSKFGIS SSSVSILMSA LTTLLMLPFI CIAMWLMDRT GRRRILLVTI PILVVSLVVL
601: VTVNIVNLSA ELHALLSTMS VGIYFCIFVM GFGPIPNIFC SEIFPNKVRA ICLAICSLIF WICDIIVTYT LPVLLRYIGL AGVFGVYAIV CVLAFIFVCL
701: KVPETKNIPI EVIAEFYALG GSGTQIIQEK QKENSEKL
001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
Arabidopsis Description
TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.