Factsheet for PGSC0003DMT400085968

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
plasma membrane 3
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025886	Potato	plasma membrane	69.33	36.5
Os03t0128932-00	Rice	nucleus	37.11	33.33
PGSC0003DMT400048038	Potato	plasma membrane	59.54	31.99
PGSC0003DMT400035507	Potato	endoplasmic reticulum, plasma membrane, vacuole	59.54	31.95
CDY33276	Canola	plasma membrane	49.48	28.74
CDY16303	Canola	plasma membrane	48.97	28.36
AT3G51490.2	Thale cress	plasma membrane	53.09	27.95
CDX73717	Canola	plasma membrane	48.97	27.9
CDX78009	Canola	plasma membrane	47.68	27.65
Bra038902.1-P	Field mustard	plasma membrane	51.29	27.15
Bra036794.1-P	Field mustard	plasma membrane	49.74	25.94
KRH28946	Soybean	plasma membrane	47.94	25.76
KRH76516	Soybean	plasma membrane	48.45	25.27
KRH07812	Soybean	plasma membrane	43.3	24.53
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	34.28	22.81
TraesCS4D01G318500.1	Wheat	cytosol, peroxisome, plasma membrane	40.98	21.49
HORVU4Hr1G082770.1	Barley	cytosol, peroxisome, plasma membrane	40.72	21.41
TraesCS4B01G322000.2	Wheat	cytosol, peroxisome, plasma membrane	40.72	21.35
TraesCS5A01G490000.1	Wheat	cytosol, peroxisome, plasma membrane	40.72	21.32
Os11t0620400-01	Rice	plasma membrane	32.73	19.3
Zm00001d048823_P007	Maize	plasma membrane	27.84	16.56
HORVU4Hr1G030400.2	Barley	extracellular, golgi, plasma membrane	15.21	14.53
EES08863	Sorghum	peroxisome, plastid	27.84	14.52
PGSC0003DMT400001526	Potato	plasma membrane	12.63	9.74
TraesCS4B01G149600.1	Wheat	plasma membrane	9.79	9.6
PGSC0003DMT400026885	Potato	plasma membrane	12.11	8.62
CDY33275	Canola	extracellular, golgi, vacuole	0.77	2.52
PGSC0003DMT400038021	Potato	extracellular	1.29	2.11

Protein Annotations

Gene3D:1.20.1250.20	MapMan:35.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:M1DAP3
InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	EnsemblPlantsGene:PGSC0003DMG400035539	PGSC:PGSC0003DMG400035539	EnsemblPlants:PGSC0003DMT400085968
PANTHER:PTHR23500	PANTHER:PTHR23500:SF180	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002949AC5	SEG:seg

Description

Sugar transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400035539]

Coordinates

chr1:-:88386348..88390053

Molecular Weight (calculated)

41535.1 Da

IEP (calculated)

4.250

GRAVY (calculated)

0.150

Length

388 amino acids

Sequence
(BLAST)

001: MALLVEGLGV GGETSVEEYI VGPTDELVED QEPSAQKDQI RLFRPEQGRS LVARPVTGQS VLGIASRQGS TFAHMPLMDP VVALFGSVYE KLPDAGSKGS
101: MLFPHLGSMF SVAGNQTKYE YWDEENLAIE GDDYASEAAA EESDDNLQSP LISRQTTSLE KDMVPPPSHG SIFSMMQGND GEPIGSAGIG GGWQLAWKWT
201: ERESDNEKKE GDLMDQHPIG PAMIHPSEAS GKGPSWRDLF EPGVQHALIV GVGIQILQQF SGINGVMYYT PQILEQAGVG VLLSNLGISS ASASLLISAI
301: TNFLMLPSIA VAMRLMDISG MRSLLLGTIP ILIIALIVLV IGIYAIVCVI SWIFVFLKVP ETKGMPLEVI SEFFVLGAKQ AAAAAANN

Best Arabidopsis Sequence Match ( AT4G35300.5 )
(BLAST)

001: MLEAKRVLQR LRGREDVSGE MALLVEGLGI GGETTIEEYI IGPADEVTDD HDIAVDKDQI KLYGAEEGLS WVARPVKGGS TMSVLSRHGS TMSRRQGSLI
101: DPLVTLFGSV HEKMPDTGSM RSALFPHFGS MFSVGGNQPR HEDWDEENLV GEGEDYPSDH GDDSEDDLHS PLISRQTTSM EKDMPHTAHG TLSTFRHGSQ
201: VQGAQGEGAG SMGIGGGWQV AWKWTEREDE SGQKEGGFKR IYLHQEGFPG SRRGSIVSLP GGDGTGEADF VQASALVSQP ALYSKDLLKE HTIGPAMVHP
301: SETTKGSIWH DLHDPGVKRA LVVGVGLQIL QQFSGINGVL YYTPQILEQA GVGILLSNMG ISSSSASLLI SALTTFVMLP AIAVAMRLMD LSGRRTLLLT
401: TIPILIASLL VLVISNLVHM NSIVHAVLST VSVVLYFCFF VMGFGPAPNI LCSEIFPTRV RGICIAICAL TFWICDIIVT YSLPVLLKSI GLAGVFGMYA
501: IVCCISWVFV FIKVPETKGM PLEVITEFFS VGARQAEAAK NE

Arabidopsis Description

TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [peroxisome,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.