Factsheet for PGSC0003DMT400026885

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g078000.2.1	Tomato	plastid	97.25	97.25
VIT_06s0004g05190.t01	Wine grape	golgi, mitochondrion, plasma membrane, plastid	73.58	79.09
Os03t0823100-01	Rice	plasma membrane	40.73	73.27
Bra002596.1-P	Field mustard	plastid	74.5	73.15
CDY33006	Canola	plastid	74.31	72.97
CDY54245	Canola	plastid	74.68	72.81
KRH29747	Soybean	plastid	73.03	72.1
KRH24741	Soybean	plastid	73.58	71.61
AT5G59250.1	Thale cress	plastid	73.21	71.51
GSMUA_Achr10P...	Banana	plastid	69.72	68.22
EER90617	Sorghum	plastid	66.06	63.72
PGSC0003DMT400001526	Potato	plasma membrane	56.7	61.43
TraesCS5D01G498200.1	Wheat	plastid	63.49	61.24
TraesCS5A01G484700.1	Wheat	plastid	63.49	61.02
HORVU5Hr1G114020.2	Barley	plastid	64.04	60.91
TraesCS5B01G498000.2	Wheat	mitochondrion, plastid	63.12	60.88
Os03t0823200-01	Rice	extracellular, mitochondrion, plasma membrane	11.56	58.33
Zm00001d012938_P002	Maize	plastid	65.87	57.81
PGSC0003DMT400038021	Potato	extracellular	13.39	30.8
PGSC0003DMT400048038	Potato	plasma membrane	26.97	20.36
PGSC0003DMT400035507	Potato	endoplasmic reticulum, plasma membrane, vacuole	26.42	19.92
PGSC0003DMT400025886	Potato	plasma membrane	26.61	19.67
PGSC0003DMT400085968	Potato	cytosol, plasma membrane, vacuole	8.62	12.11

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:102581365	MapMan:24.2.2.1.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	UniProt:M1ANU6	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
EnsemblPlantsGene:PGSC0003DMG401010374	PGSC:PGSC0003DMG401010374	EnsemblPlants:PGSC0003DMT400026885	PRINTS:PR00171	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879
TMHMM:TMhelix	UniParc:UPI000294BBDC	RefSeq:XP_006342314.1	SEG:seg	:	:

Description

Sugar transporter [Source:PGSC_GENE;Acc:PGSC0003DMG401010374]

Coordinates

chr3:+:18927110..18932374

Molecular Weight (calculated)

58232.1 Da

IEP (calculated)

8.936

GRAVY (calculated)

0.563

Length

545 amino acids

Sequence
(BLAST)

001: MGWYNPTMAL SKPPLLVPSN SWVLRGKKVI ECRRNYPLIG RKKENLVGVH FVGCKGMLRL KVSASSGEGE EAEPGYIEEF SWSSVILPFI FPALGGLLFG
101: YDIGATSGAT ISLQSPELSG MSWYNLSAVQ LGLVVSGSLY GALIGSILAY PFADFLGRRR ELIIAAILYL AGGSLTACAP GLGALLLGRL VYGLGIGLAM
201: HGAPLYIAET CPSQIRGTLI SLKELAIVLG ILLGFFVGSY EIDVIGGWRY MFGFSAPIAL LMGFGMWTLP PSPRWLLLRA IQGKGPLQEY KENAIGALSK
301: LRGRPAGDKV SEKQIEDTII SLKTAYTDEE AEGNFLEVLQ GPSLKAFTIG GGLVLFQQIT GQPSVLYYAG SILQSAGFSA AADAARVSVV IGIFKSLMTA
401: VAVLKADDLG RRPLLIGGVS GIALSLFLLS AYYKFLGSYP FVAVSALLLY VGCYQISFGP ISWLMVSEIF PLRTRGKGIS LAVLTNFGSN AIVTFAFSPL
501: KELLGAENLF LLFGVIALLS LVFVVTSVPE TKGLTLEEIE SKILK

Best Arabidopsis Sequence Match ( AT5G59250.1 )
(BLAST)

001: MAFAVSVQSH FAIRALKRDH FKNPSPRTFC SCFKSRPDSS YLSLKERTCF VSKPGLVTTR YRHIFQVGAE TGGEFADSGE VADSLASDAP ESFSWSSVIL
101: PFIFPALGGL LFGYDIGATS GATLSLQSPA LSGTTWFNFS PVQLGLVVSG SLYGALLGSI SVYGVADFLG RRRELIIAAV LYLLGSLITG CAPDLNILLV
201: GRLLYGFGIG LAMHGAPLYI AETCPSQIRG TLISLKELFI VLGILLGFSV GSFQIDVVGG WRYMYGFGTP VALLMGLGMW SLPASPRWLL LRAVQGKGQL
301: QEYKEKAMLA LSKLRGRPPG DKISEKLVDD AYLSVKTAYE DEKSGGNFLE VFQGPNLKAL TIGGGLVLFQ QITGQPSVLY YAGSILQTAG FSAAADATRV
401: SVIIGVFKLL MTWVAVAKVD DLGRRPLLIG GVSGIALSLF LLSAYYKFLG GFPLVAVGAL LLYVGCYQIS FGPISWLMVS EIFPLRTRGR GISLAVLTNF
501: GSNAIVTFAF SPLKEFLGAE NLFLLFGGIA LVSLLFVILV VPETKGLSLE EIESKILK

Arabidopsis Description

D-xylose-proton symporter-like 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WWW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.