Factsheet for PGSC0003DMT400001526

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g096950.2.1	Tomato	plasma membrane	97.81	97.81
VIT_16s0039g02170.t01	Wine grape	plasma membrane	75.15	75.6
KRH24040	Soybean	plasma membrane	72.17	73.04
KRH29016	Soybean	plasma membrane	72.17	72.46
AT5G17010.4	Thale cress	plasma membrane	71.97	71.97
CDX85478	Canola	plasma membrane	70.78	70.5
CDY38076	Canola	cytosol, plasma membrane, vacuole	70.18	70.32
GSMUA_Achr11P...	Banana	plasma membrane	68.79	69.48
CDY28736	Canola	cytosol, plasma membrane, vacuole	68.99	68.99
TraesCS1D01G200700.1	Wheat	plasma membrane	67.59	68.69
TraesCS1B01G211800.1	Wheat	plasma membrane	67.4	68.48
TraesCS1A01G197200.1	Wheat	plasma membrane	67.4	68.48
CDY23466	Canola	plasma membrane	68.19	68.19
Bra021374.1-P	Field mustard	plasma membrane	68.19	68.19
CDY49922	Canola	plasma membrane	67.99	67.99
CDY43152	Canola	cytosol, plasma membrane, vacuole	67.99	67.86
Bra032018.1-P	Field mustard	plasma membrane	67.99	67.86
AT3G03090.1	Thale cress	plasma membrane	67.79	67.79
Os10t0579200-01	Rice	plasma membrane	67.59	67.73
CDX92030	Canola	plasma membrane	67.2	67.33
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	67.2	67.33
CDX74227	Canola	cytosol, plasma membrane, vacuole	64.21	66.87
Bra023592.1-P	Field mustard	cytosol, plasma membrane, vacuole	71.17	66.67
EER91860	Sorghum	plasma membrane	66.4	65.36
CDX92028	Canola	cytosol, mitochondrion, peroxisome, vacuole	62.23	65.21
Bra001072.1-P	Field mustard	plasma membrane	48.51	65.07
Zm00001d014435_P004	Maize	plasma membrane	66.6	61.81
PGSC0003DMT400026885	Potato	plasma membrane	61.43	56.7
CDY47336	Canola	golgi, plasma membrane	25.45	49.04
PGSC0003DMT400038021	Potato	extracellular	15.51	32.91
PGSC0003DMT400048038	Potato	plasma membrane	29.62	20.64
PGSC0003DMT400025886	Potato	plasma membrane	29.82	20.35
PGSC0003DMT400035507	Potato	endoplasmic reticulum, plasma membrane, vacuole	28.23	19.64
PGSC0003DMT400085968	Potato	cytosol, plasma membrane, vacuole	9.74	12.63

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:102605744	MapMan:24.2.2.1.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	UniProt:M0ZIM5	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
EnsemblPlantsGene:PGSC0003DMG401000567	PGSC:PGSC0003DMG401000567	EnsemblPlants:PGSC0003DMT400001526	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI00029481DC	RefSeq:XP_006347568.1	SEG:seg	:

Description

Sugar transporter [Source:PGSC_GENE;Acc:PGSC0003DMG401000567]

Coordinates

chr3:-:46900365..46909493

Molecular Weight (calculated)

53792.5 Da

IEP (calculated)

5.237

GRAVY (calculated)

0.727

Length

503 amino acids

Sequence
(BLAST)

001: MATANDPEQL IVSSIDKGEN SSSEINIVRE PLLKGEHHAE NYSIRSAVLP FLFPAFGGLL YGYDIGATSS ATISIESASL SGISWYDLSS VQTGLITSGS
101: LYGALIGSAV AFQIADWLGR RRELIVSALF YFLGALVTAF APVYVILVIG RLLYGVGIGL AMHAAPMYIA ETAPSQIRGQ LISLKEFFIV FGMLVGYTVG
201: SLLIETVAGW RYMYGVSAPL AVIMGIGMWW LPSSPRWILL CAIQGKGELQ GLREKAICCL CQLRGAAIGD SASRQVDDIL SELSQLSEEK EATIGEMLQG
301: KCLKALTIGA GLILFQQITG QPSVLYYAAK IFQDAGFSAA ADATRASVFL ALLKLIMTAV AVVVIDKLGR RPLLLGGVSG IAMSLFLLGS YYTFLGDVPA
401: VAVTALLLYV GCYQLSFGPI GWLMISEIFP LRVRGRGLSI TVLVNFGANA LVAFAFSPLQ DLLGAGTVFF IFGGIAVLSL VFIFFIIPET KGLTLEEIEA
501: KYL

Best Arabidopsis Sequence Match ( AT5G17010.4 )
(BLAST)

001: MALDPEQQQP ISSVSREFGK SSGEISPERE PLIKENHVPE NYSVVAAILP FLFPALGGLL YGYEIGATSC ATISLQSPSL SGISWYNLSS VDVGLVTSGS
101: LYGALFGSIV AFTIADVIGR RKELILAALL YLVGALVTAL APTYSVLIIG RVIYGVSVGL AMHAAPMYIA ETAPSPIRGQ LVSLKEFFIV LGMVGGYGIG
201: SLTVNVHSGW RYMYATSVPL AVIMGIGMWW LPASPRWLLL RVIQGKGNVE NQREAAIKSL CCLRGPAFVD SAAEQVNEIL AELTFVGEDK EVTFGELFQG
301: KCLKALIIGG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA GDATRVSILL GLLKLIMTGV AVVVIDRLGR RPLLLGGVGG MVVSLFLLGS YYLFFSASPV
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGLSL AVLVNFGANA LVTFAFSPLK ELLGAGILFC GFGVICVLSL VFIFFIVPET KGLTLEEIEA
501: KCL

Arabidopsis Description

D-xylose-proton symporter-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.