Factsheet for Zm00001d014435_P004

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 1
plasma membrane 3
vacuole 1
golgi 1
extracellular 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91860	Sorghum	plasma membrane	91.51	97.06
Os10t0579200-01	Rice	plasma membrane	80.63	87.05
TraesCS1D01G200700.1	Wheat	plasma membrane	78.6	86.06
TraesCS1A01G197200.1	Wheat	plasma membrane	78.41	85.86
TraesCS1B01G211800.1	Wheat	plasma membrane	78.23	85.66
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	78.6	84.86
GSMUA_Achr11P...	Banana	plasma membrane	70.48	76.71
VIT_16s0039g02170.t01	Wine grape	plasma membrane	63.84	69.2
KRH29016	Soybean	plasma membrane	63.28	68.46
KRH24040	Soybean	plasma membrane	61.99	67.61
Solyc03g096950.2.1	Tomato	plasma membrane	62.18	67.0
PGSC0003DMT400001526	Potato	plasma membrane	61.81	66.6
AT5G17010.4	Thale cress	plasma membrane	61.62	66.4
CDX85478	Canola	plasma membrane	61.62	66.14
CDY38076	Canola	cytosol, plasma membrane, vacuole	60.7	65.54
CDY28736	Canola	cytosol, plasma membrane, vacuole	59.23	63.82
Bra032018.1-P	Field mustard	plasma membrane	59.23	63.69
AT3G03090.1	Thale cress	plasma membrane	58.86	63.42
CDY43152	Canola	cytosol, plasma membrane, vacuole	58.86	63.29
CDY23466	Canola	plasma membrane	58.3	62.82
Bra021374.1-P	Field mustard	plasma membrane	58.3	62.82
CDY49922	Canola	plasma membrane	58.12	62.62
CDX74227	Canola	cytosol, plasma membrane, vacuole	55.35	62.11
Bra023592.1-P	Field mustard	cytosol, plasma membrane, vacuole	61.44	62.01
CDX92030	Canola	plasma membrane	57.38	61.95
Bra001072.1-P	Field mustard	plasma membrane	41.88	60.53
CDX92028	Canola	cytosol, mitochondrion, peroxisome, vacuole	52.21	58.96
Zm00001d012938_P002	Maize	plastid	54.43	47.5
CDY47336	Canola	golgi, plasma membrane	21.96	45.59
Zm00001d016274_P011	Maize	plasma membrane	27.68	20.13
Zm00001d029762_P004	Maize	golgi, plasma membrane, vacuole	26.94	19.54
Zm00001d048823_P007	Maize	plasma membrane	23.25	19.33
Zm00001d014872_P001	Maize	plasma membrane	25.65	18.22

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:103626301	MapMan:24.2.2.1.2	UniProt:A0A1D6GTC9	ProteinID:AQK66258.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf
PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500
PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix
UniParc:UPI000842CDD5	EnsemblPlantsGene:Zm00001d014435	EnsemblPlants:Zm00001d014435_P004	EnsemblPlants:Zm00001d014435_T004	SEG:seg	:

Description

D-xylose-proton symporter-like 1

Coordinates

chr5:+:46708303..46712464

Molecular Weight (calculated)

58414.0 Da

IEP (calculated)

6.500

GRAVY (calculated)

0.601

Length

542 amino acids

Sequence
(BLAST)

001: MASHPPPAEP SSKSNKLLEL FIFFLLIDPC PRRPRLCLRQ QGQSEHEEIH VSSGGVLAYT DDDDCESRRP LLLRTPASAE CYSVSAAVFP FLFPALGGLL
101: YGYDIGATSG ATISLKSSTF SGTTWYNLSS VQTGLVVSGS LYGALIGSVL AYTIADFLGR RKELILASIS YFIGAFLTAV APNFTIMVVG RFLYGIGIGL
201: AMHAAPMYIA ETAPSQIRGM LISLKEFFIV LGMLLGYIAG NLYVEVVSGW RYMYASSTPL CLIMGVGMCW LPSSPRWLLL CAIQGKGNLP ETKENATRCL
301: CRLRGQASPD LVSEQIDLIL EELSYIDQEK QASFGEIFQG KCLKAMIIGC GLVFFQQVTG QPSVLYYAAT IFQSAGFSGA SDATRVSILL GLLKLIMTGV
401: AVLVVDRLGR RPLLIGGVSG ITVALFLLSS YYTLLKDASY VAVIALLLYV GCYQLSFGPI GWLMISEVFP LRLRGRGLGV AVLVNFASNA LVTFAFSPLE
501: DLIGTGALFS GFGVIAVASL AFIFWIVPET KGLTLEEIEA SL

Best Arabidopsis Sequence Match ( AT5G17010.4 )
(BLAST)

001: MALDPEQQQP ISSVSREFGK SSGEISPERE PLIKENHVPE NYSVVAAILP FLFPALGGLL YGYEIGATSC ATISLQSPSL SGISWYNLSS VDVGLVTSGS
101: LYGALFGSIV AFTIADVIGR RKELILAALL YLVGALVTAL APTYSVLIIG RVIYGVSVGL AMHAAPMYIA ETAPSPIRGQ LVSLKEFFIV LGMVGGYGIG
201: SLTVNVHSGW RYMYATSVPL AVIMGIGMWW LPASPRWLLL RVIQGKGNVE NQREAAIKSL CCLRGPAFVD SAAEQVNEIL AELTFVGEDK EVTFGELFQG
301: KCLKALIIGG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA GDATRVSILL GLLKLIMTGV AVVVIDRLGR RPLLLGGVGG MVVSLFLLGS YYLFFSASPV
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGLSL AVLVNFGANA LVTFAFSPLK ELLGAGILFC GFGVICVLSL VFIFFIVPET KGLTLEEIEA
501: KCL

Arabidopsis Description

D-xylose-proton symporter-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.