Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85478 | Canola | plasma membrane | 92.45 | 92.08 |
| CDY38076 | Canola | cytosol, plasma membrane, vacuole | 91.05 | 91.24 |
| Bra023592.1-P | Field mustard | cytosol, plasma membrane, vacuole | 92.45 | 86.59 |
| AT3G03090.1 | Thale cress | plasma membrane | 79.52 | 79.52 |
| KRH29016 | Soybean | plasma membrane | 75.35 | 75.65 |
| KRH24040 | Soybean | plasma membrane | 74.16 | 75.05 |
| VIT_16s0039g02170.t01 | Wine grape | plasma membrane | 73.96 | 74.4 |
| PGSC0003DMT400001526 | Potato | plasma membrane | 71.97 | 71.97 |
| Solyc03g096950.2.1 | Tomato | plasma membrane | 71.17 | 71.17 |
| GSMUA_Achr11P... | Banana | plasma membrane | 69.38 | 70.08 |
| TraesCS1D01G200700.1 | Wheat | plasma membrane | 67.59 | 68.69 |
| TraesCS1A01G197200.1 | Wheat | plasma membrane | 67.59 | 68.69 |
| TraesCS1B01G211800.1 | Wheat | plasma membrane | 67.4 | 68.48 |
| Os10t0579200-01 | Rice | plasma membrane | 67.79 | 67.93 |
| HORVU1Hr1G051290.3 | Barley | peroxisome, plasma membrane | 67.2 | 67.33 |
| EER91860 | Sorghum | plasma membrane | 66.0 | 64.97 |
| Zm00001d014435_P004 | Maize | plasma membrane | 66.4 | 61.62 |
| AT5G59250.1 | Thale cress | plastid | 59.64 | 53.76 |
| AT4G35300.7 | Thale cress | plasma membrane | 29.03 | 19.76 |
| AT1G20840.2 | Thale cress | golgi, plasma membrane | 27.24 | 18.66 |
| AT3G51490.2 | Thale cress | plasma membrane | 25.65 | 17.5 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.2 | EntrezGene:831564 | UniProt:A0A178UGZ3 | ProteinID:AED92369.1 | ProteinID:AED92370.1 |
| ProteinID:AED92372.2 | EMBL:AK228392 | ArrayExpress:AT5G17010 | EnsemblPlantsGene:AT5G17010 | RefSeq:AT5G17010 | TAIR:AT5G17010 |
| RefSeq:AT5G17010-TAIR-G | EnsemblPlants:AT5G17010.4 | TAIR:AT5G17010.4 | Unigene:At.31608 | EMBL:BT015128 | ProteinID:CAC01714.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005351 | GO:GO:0005355 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008643 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0035428 |
| GO:GO:0046323 | GO:GO:0055085 | GO:GO:1902600 | GO:GO:1904659 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | RefSeq:NP_001318578.1 | RefSeq:NP_197203.1 | RefSeq:NP_850835.2 | RefSeq:NP_850836.2 |
| ProteinID:OAO93048.1 | PFAM:PF00083 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00171 | ScanProsite:PS00216 |
| ScanProsite:PS00217 | PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF159 | UniProt:Q6AWX0 | SUPFAM:SSF103473 |
| InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS | TIGRFAMs:TIGR00879 | TMHMM:TMhelix | UniParc:UPI000034F222 | SEG:seg |
Description
D-xylose-proton symporter-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX0]
Coordinates
chr5:-:5587344..5592534
Molecular Weight (calculated)
53541.6 Da
IEP (calculated)
6.742
GRAVY (calculated)
0.773
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MALDPEQQQP ISSVSREFGK SSGEISPERE PLIKENHVPE NYSVVAAILP FLFPALGGLL YGYEIGATSC ATISLQSPSL SGISWYNLSS VDVGLVTSGS
101: LYGALFGSIV AFTIADVIGR RKELILAALL YLVGALVTAL APTYSVLIIG RVIYGVSVGL AMHAAPMYIA ETAPSPIRGQ LVSLKEFFIV LGMVGGYGIG
201: SLTVNVHSGW RYMYATSVPL AVIMGIGMWW LPASPRWLLL RVIQGKGNVE NQREAAIKSL CCLRGPAFVD SAAEQVNEIL AELTFVGEDK EVTFGELFQG
301: KCLKALIIGG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA GDATRVSILL GLLKLIMTGV AVVVIDRLGR RPLLLGGVGG MVVSLFLLGS YYLFFSASPV
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGLSL AVLVNFGANA LVTFAFSPLK ELLGAGILFC GFGVICVLSL VFIFFIVPET KGLTLEEIEA
501: KCL
101: LYGALFGSIV AFTIADVIGR RKELILAALL YLVGALVTAL APTYSVLIIG RVIYGVSVGL AMHAAPMYIA ETAPSPIRGQ LVSLKEFFIV LGMVGGYGIG
201: SLTVNVHSGW RYMYATSVPL AVIMGIGMWW LPASPRWLLL RVIQGKGNVE NQREAAIKSL CCLRGPAFVD SAAEQVNEIL AELTFVGEDK EVTFGELFQG
301: KCLKALIIGG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA GDATRVSILL GLLKLIMTGV AVVVIDRLGR RPLLLGGVGG MVVSLFLLGS YYLFFSASPV
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGLSL AVLVNFGANA LVTFAFSPLK ELLGAGILFC GFGVICVLSL VFIFFIVPET KGLTLEEIEA
501: KCL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.