Factsheet for GSMUA_Achr11P06240_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0579200-01	Rice	plasma membrane	79.12	78.49
TraesCS1D01G200700.1	Wheat	plasma membrane	76.71	77.17
TraesCS1A01G197200.1	Wheat	plasma membrane	76.71	77.17
TraesCS1B01G211800.1	Wheat	plasma membrane	76.51	76.97
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	77.11	76.49
EER91860	Sorghum	plasma membrane	76.51	74.56
VIT_16s0039g02170.t01	Wine grape	plasma membrane	73.69	73.4
KRH24040	Soybean	plasma membrane	70.88	71.03
Zm00001d014435_P004	Maize	plasma membrane	76.71	70.48
KRH29016	Soybean	plasma membrane	70.88	70.46
CDX85478	Canola	plasma membrane	70.88	69.9
AT5G17010.4	Thale cress	plasma membrane	70.08	69.38
CDY38076	Canola	cytosol, plasma membrane, vacuole	69.88	69.32
PGSC0003DMT400001526	Potato	plasma membrane	69.48	68.79
Solyc03g096950.2.1	Tomato	plasma membrane	69.28	68.59
CDY28736	Canola	cytosol, plasma membrane, vacuole	66.87	66.2
Bra021374.1-P	Field mustard	plasma membrane	66.87	66.2
CDY23466	Canola	plasma membrane	66.87	66.2
CDY49922	Canola	plasma membrane	66.67	66.0
CDY43152	Canola	cytosol, plasma membrane, vacuole	66.47	65.67
Bra032018.1-P	Field mustard	plasma membrane	66.47	65.67
Bra023592.1-P	Field mustard	cytosol, plasma membrane, vacuole	70.48	65.36
CDX92030	Canola	plasma membrane	65.46	64.94
AT3G03090.1	Thale cress	plasma membrane	64.86	64.21
CDX74227	Canola	cytosol, plasma membrane, vacuole	62.05	63.98
CDX92028	Canola	cytosol, mitochondrion, peroxisome, vacuole	59.24	61.46
Bra001072.1-P	Field mustard	plasma membrane	46.18	61.33
GSMUA_Achr10P...	Banana	plastid	62.65	56.01
CDY47336	Canola	golgi, plasma membrane	24.3	46.36
GSMUA_AchrUn_...	Banana	plasma membrane	27.51	22.76
GSMUA_Achr1P02850_001	Banana	plasma membrane	27.71	21.84
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	25.3	21.61
GSMUA_Achr3P13930_001	Banana	plasma membrane	27.91	19.77
GSMUA_Achr4P25880_001	Banana	plasma membrane	27.91	19.74
GSMUA_Achr5P15870_001	Banana	plasma membrane	29.12	19.65

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr11G06240_001
EnsemblPlants:GSMUA_Achr11P06240_001	EnsemblPlants:GSMUA_Achr11T06240_001	InterPro:IPR020846	UniProt:M0RPV4	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	PFscan:PS50850	PANTHER:PTHR23500
PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix
UniParc:UPI000294E23D	SEG:seg	:	:	:	:

Description

D-xylose-proton symporter-like 2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G06240_001]

Coordinates

chr11:-:4845012..4856457

Molecular Weight (calculated)

53160.9 Da

IEP (calculated)

8.233

GRAVY (calculated)

0.778

Length

498 amino acids

Sequence
(BLAST)

001: MASGANSDRL LARDVTSSEI ENPRQPLING VTSSESYSAT AAILPFFFPA LGGLLYGYDI GATSGAKISL QSSSLSGTTW YNLSSLEIGL VVSGSLYGAL
101: IGSALAFTIA DFLGRRRELL LSAVLYFVGA LLTALAPNFP VMVIGRFVYG TGIGLAMHAA PMYIAETCPT QIRGRLISLK EFFIVFGMLL GYISGSIYVD
201: LIGGWRYMYA TSAPICLIMG IGMWWLPPSP RWLLLCAIQG KGSLPHAKEV GITCLCRLRG VAFSSSASEQ VDLILDELSY VDQEKQAAFS EIFRGKCLKA
301: LIIGAGLVFF QQVTGQPSVL YYAATILQSA GFSAASDATR VSILLGLLKL IMTGVAVLVV DRLGRRPLLI GGVSGIAISL FLLSSYYTLL NSLPSVAVIA
401: LLLYVGCYQL SFGPIGWLMI SEIFPLRLRG RGLSIAVLVN FASNALVTFA FSPLETLVGT GVLFAGFGVI AISSLLFIFF IVPETKGLTL EEIEAKIL

Best Arabidopsis Sequence Match ( AT5G17010.4 )
(BLAST)

001: MALDPEQQQP ISSVSREFGK SSGEISPERE PLIKENHVPE NYSVVAAILP FLFPALGGLL YGYEIGATSC ATISLQSPSL SGISWYNLSS VDVGLVTSGS
101: LYGALFGSIV AFTIADVIGR RKELILAALL YLVGALVTAL APTYSVLIIG RVIYGVSVGL AMHAAPMYIA ETAPSPIRGQ LVSLKEFFIV LGMVGGYGIG
201: SLTVNVHSGW RYMYATSVPL AVIMGIGMWW LPASPRWLLL RVIQGKGNVE NQREAAIKSL CCLRGPAFVD SAAEQVNEIL AELTFVGEDK EVTFGELFQG
301: KCLKALIIGG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA GDATRVSILL GLLKLIMTGV AVVVIDRLGR RPLLLGGVGG MVVSLFLLGS YYLFFSASPV
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGLSL AVLVNFGANA LVTFAFSPLK ELLGAGILFC GFGVICVLSL VFIFFIVPET KGLTLEEIEA
501: KCL

Arabidopsis Description

D-xylose-proton symporter-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.