Factsheet for GSMUA_Achr10P26560_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0823100-01	Rice	plasma membrane	42.55	78.22
VIT_06s0004g05190.t01	Wine grape	golgi, mitochondrion, plasma membrane, plastid	69.84	76.73
KRH29747	Soybean	plastid	69.48	70.11
Solyc03g078000.2.1	Tomato	plastid	68.22	69.72
PGSC0003DMT400026885	Potato	plasma membrane	68.22	69.72
KRH24741	Soybean	plastid	69.84	69.46
CDY33006	Canola	plastid	68.22	68.47
Bra002596.1-P	Field mustard	plastid	68.04	68.29
CDY54245	Canola	plastid	67.86	67.62
AT5G59250.1	Thale cress	plastid	67.68	67.56
EER90617	Sorghum	plastid	68.4	67.43
Os03t0823200-01	Rice	extracellular, mitochondrion, plasma membrane	12.93	66.67
TraesCS5D01G498200.1	Wheat	plastid	67.15	66.19
TraesCS5A01G484700.1	Wheat	plastid	67.33	66.14
TraesCS5B01G498000.2	Wheat	mitochondrion, plastid	66.61	65.66
HORVU5Hr1G114020.2	Barley	plastid	67.33	65.44
GSMUA_Achr11P...	Banana	plasma membrane	56.01	62.65
Zm00001d012938_P002	Maize	plastid	68.58	61.51
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	24.24	23.16
GSMUA_Achr1P02850_001	Banana	plasma membrane	25.67	22.63
GSMUA_AchrUn_...	Banana	plasma membrane	24.42	22.59
GSMUA_Achr5P15870_001	Banana	plasma membrane	26.57	20.05
GSMUA_Achr3P13930_001	Banana	plasma membrane	25.13	19.91
GSMUA_Achr4P25880_001	Banana	plasma membrane	24.96	19.74

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009941	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr10G26560_001
EnsemblPlants:GSMUA_Achr10P26560_001	EnsemblPlants:GSMUA_Achr10T26560_001	InterPro:IPR020846	UniProt:M0RLN0	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879
TMHMM:TMhelix	UniParc:UPI000295054B	SEG:seg	:	:	:

Description

D-xylose-proton symporter-like 3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G26560_001]

Coordinates

chr10:+:30064938..30070913

Molecular Weight (calculated)

58886.6 Da

IEP (calculated)

9.602

GRAVY (calculated)

0.537

Length

557 amino acids

Sequence
(BLAST)

001: MASVLAPSAT VRPIAGGYAS PLPSRLTPTK VHYNPQPLRS MKKSKKNAAA SQSSRLPLLP TVITPNLRLR PQAQGPDYSS PSPSDDATED AFSWSSVVIP
101: FLFPALGGLL FGYDIGATSG ASISLQSPEL SGTTWFNLSA VQLGLVVSGS LYGALAGSLI AYPTSDFLGR RRELITASVL YLVGGLVTGC APDLVVLIIG
201: RLIYGIGIGM AMHGAPLYIA ETSPSQIRGT LISLKELFIV LGILLGYLVG SVEITAVGGW RYMYGLSAPI ALAMAMGMWT LPPSPRWLLL RAVQGKGALE
301: DYKEKAMNAL AKLRGRPAGD KISERQIDET LVSLKAAYAE EESEGSLLEV FQGASLKAFI IGGGLVLFQQ ITGQPSVLYY ATSILQSAGF SAASDAARVS
401: VVIGLFKLLM TGIAVLKVDN LGRRPLLIGG VGGIVLSLFL LAAYYNVLGS LPLVAVGALL LYVGSYQVSF GPISWLMVSE IFPLRTRGRG ISLAVLTNFG
501: SNALVTFAFS PLKELLGPAN IFLLFGAIAL LSLAFVFFYV PETKGLSLEE IEAKILN

Best Arabidopsis Sequence Match ( AT5G59250.1 )
(BLAST)

001: MAFAVSVQSH FAIRALKRDH FKNPSPRTFC SCFKSRPDSS YLSLKERTCF VSKPGLVTTR YRHIFQVGAE TGGEFADSGE VADSLASDAP ESFSWSSVIL
101: PFIFPALGGL LFGYDIGATS GATLSLQSPA LSGTTWFNFS PVQLGLVVSG SLYGALLGSI SVYGVADFLG RRRELIIAAV LYLLGSLITG CAPDLNILLV
201: GRLLYGFGIG LAMHGAPLYI AETCPSQIRG TLISLKELFI VLGILLGFSV GSFQIDVVGG WRYMYGFGTP VALLMGLGMW SLPASPRWLL LRAVQGKGQL
301: QEYKEKAMLA LSKLRGRPPG DKISEKLVDD AYLSVKTAYE DEKSGGNFLE VFQGPNLKAL TIGGGLVLFQ QITGQPSVLY YAGSILQTAG FSAAADATRV
401: SVIIGVFKLL MTWVAVAKVD DLGRRPLLIG GVSGIALSLF LLSAYYKFLG GFPLVAVGAL LLYVGCYQIS FGPISWLMVS EIFPLRTRGR GISLAVLTNF
501: GSNAIVTFAF SPLKEFLGAE NLFLLFGGIA LVSLLFVILV VPETKGLSLE EIESKILK

Arabidopsis Description

D-xylose-proton symporter-like 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WWW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.