Factsheet for TraesCS5B01G498000.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G498200.1	Wheat	plastid	98.05	98.05
TraesCS5A01G484700.1	Wheat	plastid	97.7	97.35
HORVU5Hr1G114020.2	Barley	plastid	94.69	93.37
Os03t0823100-01	Rice	plasma membrane	43.54	81.19
EER90617	Sorghum	plastid	74.34	74.34
Os03t0823200-01	Rice	extracellular, mitochondrion, plasma membrane	14.16	74.07
VIT_06s0004g05190.t01	Wine grape	golgi, mitochondrion, plasma membrane, plastid	62.3	69.43
GSMUA_Achr10P...	Banana	plastid	65.66	66.61
Zm00001d012938_P002	Maize	plastid	72.74	66.18
Bra002596.1-P	Field mustard	plastid	63.36	64.5
CDY33006	Canola	plastid	63.19	64.32
CDY54245	Canola	plastid	63.19	63.86
PGSC0003DMT400026885	Potato	plasma membrane	60.88	63.12
Solyc03g078000.2.1	Tomato	plastid	60.88	63.12
AT5G59250.1	Thale cress	plastid	62.12	62.9
KRH29747	Soybean	plastid	60.18	61.59
KRH24741	Soybean	plastid	60.53	61.07
TraesCS1B01G211800.1	Wheat	plasma membrane	50.27	57.37
TraesCS1B01G215800.1	Wheat	golgi	25.84	19.65
TraesCS6B01G215800.1	Wheat	plasma membrane	25.84	19.62
TraesCS6B01G467700.1	Wheat	plasma membrane	25.13	19.53
TraesCS7B01G481200.1	Wheat	plasma membrane	26.02	19.44
TraesCS4B01G322000.2	Wheat	cytosol, peroxisome, plasma membrane	23.54	17.97
TraesCS4B01G149600.1	Wheat	plasma membrane	11.68	16.67

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009941	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G498000	EnsemblPlants:TraesCS5B01G498000.2	TIGR:cd06174	SEG:seg

Description

No Description!

Coordinates

chr5B:-:664949927..664954139

Molecular Weight (calculated)

59467.2 Da

IEP (calculated)

9.964

GRAVY (calculated)

0.535

Length

565 amino acids

Sequence
(BLAST)

001: MATSVCLPRP LATGARASIS LPARPRRLPR PRRRPHRLGG AAAGMDALHV SSRDAEPLLH PVSAAAAATA HRRLRVRTHA QGADESATGA GGGAASGADD
101: YSLAAVILPF VFPALGGLLF GYDIGATSGA TISVHSAELS GTTWFNLSSL QLGLVASGSL YGALIGSILA YRVADFLGRR IELMTAAALY ISGALTTGLA
201: PNFVVLIIGR LLYGVGIGLA MHGAPLYIAE TCPSQIRGTL ISFKELFIVG GILFGYLVGS YEIDVVGGWR YMFGFSAPLA AIMAVGMWSL PPSPRWLLLR
301: AVQGKSPMED NKKKAMNALR RLKGPSASDK VLTDEIENNL SSIKAAYADQ AEGSIFQVFE GASLKAFTIG GGLVLFQQIT GQPSVLYYAT SILQTAGFTT
401: ASDAAKVSIL IGLFKFVMTG VAVLKVDDLG RRPLMIGGVS GITVALFLLA AYYKVLSGFP YVAVGALLLY VGCYQLSFGP ISWLMVSEIF PLRTRGRGIS
501: LAVLTNFGSN ALVTLAFSPL QGYLGPANVF LLFAAISLLA LLFVILNVPE TKGLSLEEIE SILKK

Best Arabidopsis Sequence Match ( AT5G59250.1 )
(BLAST)

001: MAFAVSVQSH FAIRALKRDH FKNPSPRTFC SCFKSRPDSS YLSLKERTCF VSKPGLVTTR YRHIFQVGAE TGGEFADSGE VADSLASDAP ESFSWSSVIL
101: PFIFPALGGL LFGYDIGATS GATLSLQSPA LSGTTWFNFS PVQLGLVVSG SLYGALLGSI SVYGVADFLG RRRELIIAAV LYLLGSLITG CAPDLNILLV
201: GRLLYGFGIG LAMHGAPLYI AETCPSQIRG TLISLKELFI VLGILLGFSV GSFQIDVVGG WRYMYGFGTP VALLMGLGMW SLPASPRWLL LRAVQGKGQL
301: QEYKEKAMLA LSKLRGRPPG DKISEKLVDD AYLSVKTAYE DEKSGGNFLE VFQGPNLKAL TIGGGLVLFQ QITGQPSVLY YAGSILQTAG FSAAADATRV
401: SVIIGVFKLL MTWVAVAKVD DLGRRPLLIG GVSGIALSLF LLSAYYKFLG GFPLVAVGAL LLYVGCYQIS FGPISWLMVS EIFPLRTRGR GISLAVLTNF
501: GSNAIVTFAF SPLKEFLGAE NLFLLFGGIA LVSLLFVILV VPETKGLSLE EIESKILK

Arabidopsis Description

D-xylose-proton symporter-like 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WWW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.