Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G498200.1 | Wheat | plastid | 98.41 | 98.76 |
| TraesCS5B01G498000.2 | Wheat | mitochondrion, plastid | 97.35 | 97.7 |
| HORVU5Hr1G114020.2 | Barley | plastid | 95.77 | 94.76 |
| Os03t0823100-01 | Rice | plasma membrane | 43.92 | 82.18 |
| EER90617 | Sorghum | plastid | 74.25 | 74.51 |
| Os03t0823200-01 | Rice | extracellular, mitochondrion, plasma membrane | 14.11 | 74.07 |
| VIT_06s0004g05190.t01 | Wine grape | golgi, mitochondrion, plasma membrane, plastid | 62.79 | 70.22 |
| GSMUA_Achr10P... | Banana | plastid | 66.14 | 67.33 |
| Zm00001d012938_P002 | Maize | plastid | 73.19 | 66.83 |
| Bra002596.1-P | Field mustard | plastid | 64.02 | 65.41 |
| CDY33006 | Canola | plastid | 63.84 | 65.23 |
| CDY54245 | Canola | plastid | 63.84 | 64.76 |
| PGSC0003DMT400026885 | Potato | plasma membrane | 61.02 | 63.49 |
| Solyc03g078000.2.1 | Tomato | plastid | 61.02 | 63.49 |
| AT5G59250.1 | Thale cress | plastid | 62.43 | 63.44 |
| KRH29747 | Soybean | plastid | 60.67 | 62.32 |
| KRH24741 | Soybean | plastid | 61.02 | 61.79 |
| TraesCS1A01G197200.1 | Wheat | plasma membrane | 50.97 | 58.38 |
| TraesCS1A01G201600.2 | Wheat | plasma membrane | 25.4 | 19.38 |
| TraesCS6A01G420400.1 | Wheat | plasma membrane | 24.69 | 19.31 |
| TraesCS6A01G188700.1 | Wheat | plasma membrane | 25.22 | 19.22 |
| TraesCS7A01G556800.1 | Wheat | plasma membrane | 25.22 | 18.92 |
| TraesCS5A01G490000.1 | Wheat | cytosol, peroxisome, plasma membrane | 23.1 | 17.68 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009941 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00217 |
| PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF159 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS |
| TIGRFAMs:TIGR00879 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G484700 | EnsemblPlants:TraesCS5A01G484700.1 | TIGR:cd06174 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:655992498..655996750
Molecular Weight (calculated)
59758.6 Da
IEP (calculated)
10.010
GRAVY (calculated)
0.526
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMATSVCLP RPLATGARAS ISLPARPRRL PRPQRRPHRL GGAAVGMDAL HVSSRDAEPL LRPVSAAAAA TAHRRLRVRT HAQGADESAK DAGDGAAAGA
101: DYSLAAVILP FVFPALGGLL FGYDIGATSG ATISVHSAEL SGTTWFNLSS LQLGLVASGS LYGALGGSIL AYRIADFLGR RIELMTAAAL YISGALTTGL
201: APNFVVLIIG RLLYGVGIGL AMHGAPLYIA ETCPSQIRGT LISFKELFIV GGILFGYLVG SYEIDVVGGW RYMFGFSAPL AAIMAVGMWS LPPSPRWLLL
301: RAVQGKGPVE DNKKKAMNAL RRLKGPSASD KVLTDEIENN LSSIKAAYAD QAEGSIFQVF EGASLKAFTI GGGLVLFQQI TGQPSVLYYA TSILQTAGFT
401: TASDAAKVSI LIGLFKFVMT GVAVLKVDDL GRRPLMIGGV SGITVALFLL AAYYKVLSGF PYVAVGALLL YVGCYQLSFG PISWLMVSEI FPLRTRGRGI
501: SLAVLTNFGS NALVTFAFSP LQGYLGPANV FLLFAAISLL ALLFVILNVP ETKGLSLEEI ESKILKK
101: DYSLAAVILP FVFPALGGLL FGYDIGATSG ATISVHSAEL SGTTWFNLSS LQLGLVASGS LYGALGGSIL AYRIADFLGR RIELMTAAAL YISGALTTGL
201: APNFVVLIIG RLLYGVGIGL AMHGAPLYIA ETCPSQIRGT LISFKELFIV GGILFGYLVG SYEIDVVGGW RYMFGFSAPL AAIMAVGMWS LPPSPRWLLL
301: RAVQGKGPVE DNKKKAMNAL RRLKGPSASD KVLTDEIENN LSSIKAAYAD QAEGSIFQVF EGASLKAFTI GGGLVLFQQI TGQPSVLYYA TSILQTAGFT
401: TASDAAKVSI LIGLFKFVMT GVAVLKVDDL GRRPLMIGGV SGITVALFLL AAYYKVLSGF PYVAVGALLL YVGCYQLSFG PISWLMVSEI FPLRTRGRGI
501: SLAVLTNFGS NALVTFAFSP LQGYLGPANV FLLFAAISLL ALLFVILNVP ETKGLSLEEI ESKILKK
001: MAFAVSVQSH FAIRALKRDH FKNPSPRTFC SCFKSRPDSS YLSLKERTCF VSKPGLVTTR YRHIFQVGAE TGGEFADSGE VADSLASDAP ESFSWSSVIL
101: PFIFPALGGL LFGYDIGATS GATLSLQSPA LSGTTWFNFS PVQLGLVVSG SLYGALLGSI SVYGVADFLG RRRELIIAAV LYLLGSLITG CAPDLNILLV
201: GRLLYGFGIG LAMHGAPLYI AETCPSQIRG TLISLKELFI VLGILLGFSV GSFQIDVVGG WRYMYGFGTP VALLMGLGMW SLPASPRWLL LRAVQGKGQL
301: QEYKEKAMLA LSKLRGRPPG DKISEKLVDD AYLSVKTAYE DEKSGGNFLE VFQGPNLKAL TIGGGLVLFQ QITGQPSVLY YAGSILQTAG FSAAADATRV
401: SVIIGVFKLL MTWVAVAKVD DLGRRPLLIG GVSGIALSLF LLSAYYKFLG GFPLVAVGAL LLYVGCYQIS FGPISWLMVS EIFPLRTRGR GISLAVLTNF
501: GSNAIVTFAF SPLKEFLGAE NLFLLFGGIA LVSLLFVILV VPETKGLSLE EIESKILK
101: PFIFPALGGL LFGYDIGATS GATLSLQSPA LSGTTWFNFS PVQLGLVVSG SLYGALLGSI SVYGVADFLG RRRELIIAAV LYLLGSLITG CAPDLNILLV
201: GRLLYGFGIG LAMHGAPLYI AETCPSQIRG TLISLKELFI VLGILLGFSV GSFQIDVVGG WRYMYGFGTP VALLMGLGMW SLPASPRWLL LRAVQGKGQL
301: QEYKEKAMLA LSKLRGRPPG DKISEKLVDD AYLSVKTAYE DEKSGGNFLE VFQGPNLKAL TIGGGLVLFQ QITGQPSVLY YAGSILQTAG FSAAADATRV
401: SVIIGVFKLL MTWVAVAKVD DLGRRPLLIG GVSGIALSLF LLSAYYKFLG GFPLVAVGAL LLYVGCYQIS FGPISWLMVS EIFPLRTRGR GISLAVLTNF
501: GSNAIVTFAF SPLKEFLGAE NLFLLFGGIA LVSLLFVILV VPETKGLSLE EIESKILK
Arabidopsis Description
D-xylose-proton symporter-like 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WWW9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.