Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 3
- plasma membrane 6
- vacuole 3
- golgi 3
- extracellular 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G215800.1 | Wheat | plasma membrane | 99.73 | 99.73 |
| TraesCS6D01G177400.1 | Wheat | plasma membrane | 99.6 | 99.6 |
| Os02t0229400-01 | Rice | plasma membrane | 90.32 | 90.08 |
| KXG29850 | Sorghum | plasma membrane | 88.04 | 87.92 |
| Zm00001d016274_P011 | Maize | plasma membrane | 85.22 | 85.1 |
| GSMUA_Achr4P25880_001 | Banana | plasma membrane | 74.46 | 78.69 |
| GSMUA_Achr1P02850_001 | Banana | plasma membrane | 66.8 | 78.64 |
| GSMUA_Achr5P15870_001 | Banana | plasma membrane | 77.96 | 78.59 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 62.5 | 77.24 |
| TraesCS1A01G201600.2 | Wheat | plasma membrane | 75.54 | 75.64 |
| VIT_07s0031g02270.t01 | Wine grape | plasma membrane | 72.98 | 73.18 |
| Solyc03g032040.2.1 | Tomato | plasma membrane | 69.22 | 71.03 |
| PGSC0003DMT400048038 | Potato | plasma membrane | 68.82 | 70.91 |
| PGSC0003DMT400035507 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 67.74 | 69.71 |
| Solyc02g082410.2.1 | Tomato | plasma membrane | 65.73 | 69.17 |
| TraesCS7A01G556800.1 | Wheat | plasma membrane | 64.65 | 63.62 |
| TraesCS6A01G420400.1 | Wheat | plasma membrane | 56.85 | 58.34 |
| TraesCS5A01G490000.1 | Wheat | cytosol, peroxisome, plasma membrane | 52.28 | 52.5 |
| TraesCS1A01G197200.1 | Wheat | plasma membrane | 19.22 | 28.89 |
| TraesCS5A01G484700.1 | Wheat | plastid | 19.22 | 25.22 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 |
| ScanProsite:PS00217 | PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF165 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt |
| InterPro:Sugar_transporter_CS | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G188700 | EnsemblPlants:TraesCS6A01G188700.1 | TIGR:cd06174 | SEG:seg |
Description
No Description!
Coordinates
chr6A:-:230706249..230709707
Molecular Weight (calculated)
79907.5 Da
IEP (calculated)
5.247
GRAVY (calculated)
0.349
Length
744 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAALVAIA ASIGNLLQGW DNATIAGAVL YIKKEFQLEN NPTVEGLIVA MSLIGATIIT TFSGPVSDWV GRRPMLILSS LLYFLSGLIM LWSPNVYVLL
101: LARLVDGFGI GLAVTLVPLY ISETAPSEIR GRLNTLPQFS GSGGMFLSYC MVFGMSLLPS PDWRIMLGVL SVPSLFFFIL TVFYLPESPR WLVSKGRMAE
201: AKKVLQRLRG REDVSGEMAL LVEGLEVGGD TSIEEYIIGP ANDPADDHVV DGDNDQITLY GPEEGQSWIA RPSKGPSMLG SVLSLASRHG SMVNQSVPLM
301: DPLVTLFGSV HENMPQVGGS MRSTLFPNFG SMLSVADQHP KTEHWDEENV HRDDEEYASD AGGDYEDNVH SPLLSRQTTN TDGKDHGHHG STLGMRRRSL
401: LEEGGEAVSS TGIGGGWQLA WKWSERQGED GKKEGGFKRI YLHQEGVADS RRGSVVSLPG GGDATQGGSG FIHAAALVSH SALYSKDLME ERMAAGPAMI
501: HPLEAAPKGS IWKDLFEPGV RRALFVGVGI QMLQQFAGIN GVLYYTPQIL EQAGVAVLLS NLGLSSASAS ILISSLTTLL MLPSIGVAMR LMDISGRRFL
601: LLGTIPILIA SLIVLVVSNV INLSTVPHAV LSTVSVIVYF CCFVMGFGPI PNILCAEIFP TRVRGVCIAI CALTFWICDI IVTYSLPVML NAIGLAGVFG
701: IYAVVCCIAF VFVYLKVPET KGMPLEVITE FFAVGAKQAQ ATIA
101: LARLVDGFGI GLAVTLVPLY ISETAPSEIR GRLNTLPQFS GSGGMFLSYC MVFGMSLLPS PDWRIMLGVL SVPSLFFFIL TVFYLPESPR WLVSKGRMAE
201: AKKVLQRLRG REDVSGEMAL LVEGLEVGGD TSIEEYIIGP ANDPADDHVV DGDNDQITLY GPEEGQSWIA RPSKGPSMLG SVLSLASRHG SMVNQSVPLM
301: DPLVTLFGSV HENMPQVGGS MRSTLFPNFG SMLSVADQHP KTEHWDEENV HRDDEEYASD AGGDYEDNVH SPLLSRQTTN TDGKDHGHHG STLGMRRRSL
401: LEEGGEAVSS TGIGGGWQLA WKWSERQGED GKKEGGFKRI YLHQEGVADS RRGSVVSLPG GGDATQGGSG FIHAAALVSH SALYSKDLME ERMAAGPAMI
501: HPLEAAPKGS IWKDLFEPGV RRALFVGVGI QMLQQFAGIN GVLYYTPQIL EQAGVAVLLS NLGLSSASAS ILISSLTTLL MLPSIGVAMR LMDISGRRFL
601: LLGTIPILIA SLIVLVVSNV INLSTVPHAV LSTVSVIVYF CCFVMGFGPI PNILCAEIFP TRVRGVCIAI CALTFWICDI IVTYSLPVML NAIGLAGVFG
701: IYAVVCCIAF VFVYLKVPET KGMPLEVITE FFAVGAKQAQ ATIA
001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
Arabidopsis Description
TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.