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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 8
  • endoplasmic reticulum 3
  • vacuole 3
  • golgi 3
  • extracellular 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG29850 Sorghum plasma membrane 91.82 91.95
TraesCS6B01G215800.1 Wheat plasma membrane 90.21 90.46
TraesCS6A01G188700.1 Wheat plasma membrane 90.08 90.32
TraesCS6D01G177400.1 Wheat plasma membrane 89.81 90.05
Zm00001d016274_P011 Maize plasma membrane 88.34 88.46
GSMUA_Achr5P15870_001 Banana plasma membrane 79.76 80.62
GSMUA_Achr4P25880_001 Banana plasma membrane 75.47 79.97
GSMUA_Achr1P02850_001 Banana plasma membrane 66.89 78.96
GSMUA_AchrUn_... Banana plasma membrane 62.47 77.41
Os10t0539900-01 Rice plasma membrane 76.41 77.03
VIT_07s0031g02270.t01 Wine grape plasma membrane 73.32 73.72
Solyc03g032040.2.1 Tomato plasma membrane 69.84 71.86
PGSC0003DMT400048038 Potato plasma membrane 69.17 71.47
PGSC0003DMT400035507 Potato endoplasmic reticulum, plasma membrane, vacuole 68.36 70.54
Solyc02g082410.2.1 Tomato plasma membrane 66.49 70.16
Os11t0475600-01 Rice plasma membrane 65.82 64.86
Os02t0832100-00 Rice golgi, mitochondrion, plasma membrane, plastid 36.33 61.04
Os04t0654550-00 Rice endoplasmic reticulum, extracellular 5.09 56.72
Os03t0128932-00 Rice nucleus 29.76 51.39
Os11t0620400-01 Rice plasma membrane 40.88 46.35
Os03t0823100-01 Rice plasma membrane 12.33 30.36
Os10t0579200-01 Rice plasma membrane 20.38 30.28
Os03t0823200-01 Rice extracellular, mitochondrion, plasma membrane 3.89 26.85
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.4EntrezGene:4328798ProteinID:BAD26163.1ProteinID:BAF08273.1ProteinID:BAS77762.1
ProteinID:BAS77763.1GO:GO:0003674GO:GO:0005215GO:GO:0005351GO:GO:0005355GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0046323
GO:GO:0055085GO:GO:1902600EMBL:GU066766InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sfEnsemblPlantsGene:Os02g0229400EnsemblPlants:Os02t0229400-01PFAM:PF00083PRINTS:PR00171ScanProsite:PS00216
ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF165UniProt:Q6H536SUPFAM:SSF103473
InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTMHMM:TMhelixUniParc:UPI00003B4636RefSeq:XP_015625962.1RefSeq:XP_015625963.1
SEG:seg:::::
Description
TONOPLAST MONOSACCHARIDE TRANSPORTER 2Tonoplast monosaccharide transpoter, Vacuolar sugar transport (Os02t0229400-01);Similar to Hexose transporter. (Os02t0229400-02)
Coordinates
chr2:+:7273036..7278242
Molecular Weight (calculated)
80113.8 Da
IEP (calculated)
5.107
GRAVY (calculated)
0.361
Length
746 amino acids
Sequence
(BLAST)
001: MSGAALVAIA ASIGNLLQGW DNATIAGAVL YIKKEFKLES EPTVEGLIVA MSLIGATIIT TFSGPVSDWI GRRPMLILSS ILYFLSSLIM LWSPNVYVLL
101: LARLIDGFGI GLAVTLVPLY ISETAPSEIR GLLNTLPQFS GSGGMFLSYC MVFGMSLLPS PDWRIMLGVL AIPSLFFFGL TIFYLPESPR WLVSKGRMAE
201: AKKVLQKLRG REDVSGEMAL LVEGLEVGAD TSIEEYIIGP AIEPADEHVV DGDKDQITLY GPEEGQSWIA RPSKGPSILG SVLSLTSRHG SMVNQSVPLM
301: DPIVTLFGSV HENMPHAGGS MRSTLFPNFG SMFSVTDQHP KVDQWDEENL HRDDEEYASD GAGGDYEDNV HSPLLSRQTT SAEGKDIAHH AHRGSALSMR
401: RRSLLEEGGE AVSSTGIGGG WQLAWKWSER EGEDGKKEGG FKRIYLHQEE VPGSRRGSVI SLPGGGDAPE GSEFIHAAAL VSQPALYSKD IIEQRMSGPA
501: MIHPSEAAAK GSSWKDLFEP GVRRALLVGV GIQILQQFAG INGVLYYTPQ ILEQAGVAVL LSNLGLSSAS ASILISSLTT LLMLPSIGLA MRLMDISGRR
601: FLLLGTIPVL IASLVVLVVS NVIDLGTVAH AALSTISVII YFCCFVMGFG PIPNILCAEI FPTRVRGICI AICALTFWIG DIIVTYSLPV MLNAIGLAGV
701: FGIYAVVCSI AFVFVFLKVP ETKGMPLEVI TEFFAVGAKQ MQATKA
Best Arabidopsis Sequence Match ( AT4G35300.4 )
(BLAST)
001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
Arabidopsis Description
TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.