Factsheet for Solyc02g082410.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
plasma membrane 6
vacuole 2
golgi 2
extracellular 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035507	Potato	endoplasmic reticulum, plasma membrane, vacuole	98.3	96.13
Solyc03g032040.2.1	Tomato	plasma membrane	84.44	82.34
VIT_07s0031g02270.t01	Wine grape	plasma membrane	75.81	72.24
GSMUA_Achr5P15870_001	Banana	plasma membrane	72.84	69.78
GSMUA_Achr1P02850_001	Banana	plasma membrane	61.67	68.99
GSMUA_Achr4P25880_001	Banana	plasma membrane	68.18	68.47
Solyc04g082700.2.1	Tomato	endoplasmic reticulum	70.16	67.21
GSMUA_AchrUn_...	Banana	plasma membrane	56.72	66.61
Os02t0229400-01	Rice	plasma membrane	70.16	66.49
EER94578	Sorghum	golgi, plasma membrane, vacuole	69.45	66.35
KXG29850	Sorghum	plasma membrane	69.59	66.04
GSMUA_Achr3P13930_001	Banana	plasma membrane	65.49	65.86
TraesCS1B01G215800.1	Wheat	golgi	69.17	65.81
HORVU1Hr1G052040.1	Barley	vacuole	69.17	65.73
TraesCS6A01G188700.1	Wheat	plasma membrane	69.17	65.73
TraesCS6B01G215800.1	Wheat	plasma membrane	69.17	65.73
TraesCS1A01G201600.2	Wheat	plasma membrane	69.02	65.68
TraesCS1D01G204900.1	Wheat	golgi, plasma membrane, vacuole	69.02	65.68
Os10t0539900-01	Rice	plasma membrane	68.74	65.68
TraesCS6D01G177400.1	Wheat	plasma membrane	69.02	65.59
Zm00001d029762_P004	Maize	golgi, plasma membrane, vacuole	68.6	64.93
Zm00001d016274_P011	Maize	plasma membrane	67.61	64.16
Solyc03g096950.2.1	Tomato	plasma membrane	20.08	28.23
Solyc03g078000.2.1	Tomato	plastid	20.08	26.05

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.4	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659
InterPro:IPR020846	UniProt:K4BAB1	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF180
SUPFAM:SSF103473	EnsemblPlantsGene:Solyc02g082410.2	EnsemblPlants:Solyc02g082410.2.1	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TMHMM:TMhelix
UniParc:UPI0002767F1C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:46101512..46105875

Molecular Weight (calculated)

76060.1 Da

IEP (calculated)

5.520

GRAVY (calculated)

0.335

Length

707 amino acids

Sequence
(BLAST)

001: MDGAVLVALT AAIGNLLQGW DNATIAGAVL YIKKEFNLQT QAGIEGLIVA MSLIGATVIT TCSGPVSDMF GRRPMLIISS VLYFVSGLVM LWSPSINVLL
101: LARLLDGFGI GLAVTLVPVY ISETAPPEIR GRLNTFPQFT GSVGMFLSYC MVFSMSLTVS PSWRLMLGVL SIPSLAYFFL ALFYLPESPR WLVSKGRMKE
201: AKKVLQRLRG RDDVSGEMAL LMEGLGAGGE VSIEEYIISP DDELDDNQEH AVEKDRIKLY GAEEGQSWIA KPVTGQSTLG LVSRHGSVCH EKLPKMGSMR
301: SMLFTNFGSM FNISESQVKH ENWDEESQRD GDKHSDASGA ESDDNLRSPL LSRQGSGTEG PPTSLSMRQG SSYNTANAGE HASMGIGGGW QLAYRKDEKK
401: EGALKRIYLH QEASVGSRRG SIMSLPGCDA HGEGDTVHAA ALVSQSVLRT ESILAQQTIE EAVEKQTGPI TKAIGWRALF EPGVKHALIV GVGIQILQQF
501: SGINGVLYYT PQILEQAGVG VLLSNLGIGS ESASFLISGL TTLLMLPSIG IAMRLMDIAG RRLLLLTTLP VLLLSLIVLV LGNVIDMGEV THAVISTISV
601: VVYFCCFVTG FGPIPNILCS EIFPTSVRGI CIAICALTFW IGDIIVTYSL PVMLNTIGLA GVFGIYAVVC AIAWVFVFLK VPETKGMPLE VITEFFAVGA
701: NKQPGKE

Best Arabidopsis Sequence Match ( AT4G35300.4 )
(BLAST)

001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE

Arabidopsis Description

TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.