Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- plasma membrane 5
- vacuole 3
- golgi 4
- extracellular 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G204900.1 | Wheat | golgi, plasma membrane, vacuole | 99.87 | 99.87 |
| TraesCS1B01G215800.1 | Wheat | golgi | 99.73 | 99.73 |
| HORVU1Hr1G052040.1 | Barley | vacuole | 98.65 | 98.52 |
| Os10t0539900-01 | Rice | plasma membrane | 90.71 | 91.08 |
| EER94578 | Sorghum | golgi, plasma membrane, vacuole | 89.91 | 90.27 |
| Zm00001d029762_P004 | Maize | golgi, plasma membrane, vacuole | 87.62 | 87.15 |
| GSMUA_Achr4P25880_001 | Banana | plasma membrane | 72.81 | 76.85 |
| GSMUA_Achr1P02850_001 | Banana | plasma membrane | 65.28 | 76.74 |
| GSMUA_Achr5P15870_001 | Banana | plasma membrane | 75.77 | 76.29 |
| TraesCS6A01G188700.1 | Wheat | plasma membrane | 75.64 | 75.54 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 59.89 | 73.92 |
| VIT_07s0031g02270.t01 | Wine grape | plasma membrane | 71.6 | 71.7 |
| PGSC0003DMT400048038 | Potato | plasma membrane | 68.37 | 70.36 |
| Solyc03g032040.2.1 | Tomato | plasma membrane | 68.37 | 70.07 |
| Solyc02g082410.2.1 | Tomato | plasma membrane | 65.68 | 69.02 |
| PGSC0003DMT400035507 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 66.76 | 68.6 |
| TraesCS7A01G556800.1 | Wheat | plasma membrane | 65.68 | 64.55 |
| TraesCS6A01G420400.1 | Wheat | plasma membrane | 56.39 | 57.79 |
| TraesCS5A01G490000.1 | Wheat | cytosol, peroxisome, plasma membrane | 52.62 | 52.77 |
| TraesCS1A01G197200.1 | Wheat | plasma membrane | 18.98 | 28.48 |
| TraesCS5A01G484700.1 | Wheat | plastid | 19.38 | 25.4 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 |
| ScanProsite:PS00217 | PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF165 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt |
| InterPro:Sugar_transporter_CS | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1A01G201600 | EnsemblPlants:TraesCS1A01G201600.2 | TIGR:cd06174 | SEG:seg |
Description
No Description!
Coordinates
chr1A:+:362862370..362865830
Molecular Weight (calculated)
79130.9 Da
IEP (calculated)
4.593
GRAVY (calculated)
0.438
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAVLVAIA ASIGNLLQGW DNATIAGAVL YIKKEFSLET QPLIEGLIVA MSLIGATVIT TFSGAVADAV GRRPLLIASS VLYFVSGLVM LWAPNVYVLL
101: LARLIDGFGI GLAVTLVPLY ISETAPTDIR GLLNTLPQFS GSGGMFLSYC MVFTMSLMPQ PDWRIMLGVL SIPSLMYFAL TVFYLPESPR WLVSKGRMAE
201: AKRVLQGLRG REDVSGEMAL LVEGLGVGKD THFEEYIIGP DDELADDGLA PDEEKLKLYG AEEGVSWIAR PVRGGGQSAL GSALGLMSRH GSMVSQGKSL
301: VDPLVTLFGS VHEKMPEVMG SMRSTLFPNF GSMFSVAEQQ QAKADWDAES HRDDEDYASD HGADDIEDSL NSPLISRQAT SVEGKEIAAP HGSIMGGVGR
401: SSSMQGGEAV SSMGIGGGWQ LAWKWTEREG ADGQKEGGFQ RIYLHEEGVS GDRRGSILSM PGGDIPPGGE YIQAAALVSQ PALYSKDLIE QQLAGPAMVH
501: PSEAVAKGTK WAELFEPGVK HALFVGIGLQ ILQQFAGING VLYYTPQILE QAGVGVLLSN IGLSSSSASI LISALTTLLM LPSIGIAMRL MDMSGRRFLL
601: LSTIPVLIVA LAVLVLVNVL DVGTMVHAAL STISVIVYFC FFVMGFGPIP NILCAEIFPT SVRGICIAIC ALTFWIGDII VTYTLPVMLN AIGLAGVFGI
701: YAIVCVLAFV FVYMKVPETK GMPLEVITEF FSVGAKQGKE ATD
101: LARLIDGFGI GLAVTLVPLY ISETAPTDIR GLLNTLPQFS GSGGMFLSYC MVFTMSLMPQ PDWRIMLGVL SIPSLMYFAL TVFYLPESPR WLVSKGRMAE
201: AKRVLQGLRG REDVSGEMAL LVEGLGVGKD THFEEYIIGP DDELADDGLA PDEEKLKLYG AEEGVSWIAR PVRGGGQSAL GSALGLMSRH GSMVSQGKSL
301: VDPLVTLFGS VHEKMPEVMG SMRSTLFPNF GSMFSVAEQQ QAKADWDAES HRDDEDYASD HGADDIEDSL NSPLISRQAT SVEGKEIAAP HGSIMGGVGR
401: SSSMQGGEAV SSMGIGGGWQ LAWKWTEREG ADGQKEGGFQ RIYLHEEGVS GDRRGSILSM PGGDIPPGGE YIQAAALVSQ PALYSKDLIE QQLAGPAMVH
501: PSEAVAKGTK WAELFEPGVK HALFVGIGLQ ILQQFAGING VLYYTPQILE QAGVGVLLSN IGLSSSSASI LISALTTLLM LPSIGIAMRL MDMSGRRFLL
601: LSTIPVLIVA LAVLVLVNVL DVGTMVHAAL STISVIVYFC FFVMGFGPIP NILCAEIFPT SVRGICIAIC ALTFWIGDII VTYTLPVMLN AIGLAGVFGI
701: YAIVCVLAFV FVYMKVPETK GMPLEVITEF FSVGAKQGKE ATD
001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
Arabidopsis Description
TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.