Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 6
- endoplasmic reticulum 3
- vacuole 4
- golgi 4
- extracellular 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0539900-01 | Rice | plasma membrane | 94.73 | 94.73 |
| Zm00001d029762_P004 | Maize | golgi, plasma membrane, vacuole | 94.73 | 93.84 |
| TraesCS1B01G215800.1 | Wheat | golgi | 90.54 | 90.17 |
| TraesCS1D01G204900.1 | Wheat | golgi, plasma membrane, vacuole | 90.41 | 90.04 |
| TraesCS1A01G201600.2 | Wheat | plasma membrane | 90.27 | 89.91 |
| HORVU1Hr1G052040.1 | Barley | vacuole | 90.27 | 89.78 |
| GSMUA_Achr4P25880_001 | Banana | plasma membrane | 75.41 | 79.26 |
| GSMUA_Achr5P15870_001 | Banana | plasma membrane | 78.78 | 79.0 |
| GSMUA_Achr1P02850_001 | Banana | plasma membrane | 66.76 | 78.16 |
| KXG29850 | Sorghum | plasma membrane | 76.62 | 76.11 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 61.62 | 75.75 |
| VIT_07s0031g02270.t01 | Wine grape | plasma membrane | 74.05 | 73.85 |
| PGSC0003DMT400048038 | Potato | plasma membrane | 68.78 | 70.5 |
| Solyc03g032040.2.1 | Tomato | plasma membrane | 68.78 | 70.21 |
| Solyc02g082410.2.1 | Tomato | plasma membrane | 66.35 | 69.45 |
| PGSC0003DMT400035507 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 67.3 | 68.88 |
| EER90435 | Sorghum | plasma membrane | 64.86 | 62.58 |
| OQU86030 | Sorghum | plasma membrane | 36.89 | 54.82 |
| EES08863 | Sorghum | peroxisome, plastid | 37.03 | 36.83 |
| EER91860 | Sorghum | plasma membrane | 20.0 | 28.96 |
| EER90617 | Sorghum | plastid | 20.68 | 27.08 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | EntrezGene:8062860 | UniProt:C5WTL2 | EnsemblPlants:EER94578 | ProteinID:EER94578 |
| ProteinID:EER94578.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005351 | GO:GO:0005355 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0035428 | GO:GO:0046323 | GO:GO:0055085 | GO:GO:1902600 | GO:GO:1904659 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 |
| ScanProsite:PS00217 | PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF165 | EnsemblPlantsGene:SORBI_3001G312900 | SUPFAM:SSF103473 |
| unigene:Sbi.15246 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS | TMHMM:TMhelix | UniParc:UPI0001A8303C | RefSeq:XP_002467580.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:59989927..59995061
Molecular Weight (calculated)
78917.9 Da
IEP (calculated)
4.639
GRAVY (calculated)
0.449
Length
740 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGAVLVAIA ASIGNLLQGW DNATIAGAVL YIKKEFNLQS EPLIEGLIVA MSLIGATVIT TFSGAVADSV GRRPMLIASA ILYFVSGLVM LWAPNVYVLL
101: LARLIDGFGI GLAVTLVPLY ISETAPTDIR GLLNTLPQFS GSGGMFLSYC MVFGMSLMPT PDWRLMLGVL SIPSLIYFGL TIFYLPESPR WLVSKGRMAE
201: AKRVLQRLRG REDVSGEMAL LVEGLGVGKD TRIEEYIIGP DDELADEGLA PDPEKIKLYG PEEGLSWVAR PVRGQSALGS ALGLISRHGS MASQGKPLVD
301: PVVTLFGSVH EKMPEIMGSM RSTLFPNFGS MFSVAEQQQV KADWDAESQR EGDDYASDHG GDDIEDNLQS PLISRQATSV EGKEIAAPHG SIMGAVGRSS
401: SLQGGEAVSS MGIGGGWQLA WKWTEREGED GEKEGGFQRI YLHEEGVQGR GSILSLPGGD VPPGGEFVQA AALVSQPALY SKELLEQRAA GPAMMHPSEA
501: VAKGPRWADL FEPGVKHALF VGIGIQILQQ FAGINGVLYY TPQILEQAGV GVLLSNIGLS ASSASILISA LTTLLMLPSI GIAMRLMDMS GRRFLLLATI
601: PILIVALAIL VVVNIVDVGT MVHAALSTIS VIVYFCFFVM GFGPIPNILC AEIFPTTVRG ICIAICALTF WIGDIIVTYT LPVMLNAIGL AGVFGIYAVV
701: CILALVFVFI KVPETKGMPL EVITEFFSVG AKQAKEARED
101: LARLIDGFGI GLAVTLVPLY ISETAPTDIR GLLNTLPQFS GSGGMFLSYC MVFGMSLMPT PDWRLMLGVL SIPSLIYFGL TIFYLPESPR WLVSKGRMAE
201: AKRVLQRLRG REDVSGEMAL LVEGLGVGKD TRIEEYIIGP DDELADEGLA PDPEKIKLYG PEEGLSWVAR PVRGQSALGS ALGLISRHGS MASQGKPLVD
301: PVVTLFGSVH EKMPEIMGSM RSTLFPNFGS MFSVAEQQQV KADWDAESQR EGDDYASDHG GDDIEDNLQS PLISRQATSV EGKEIAAPHG SIMGAVGRSS
401: SLQGGEAVSS MGIGGGWQLA WKWTEREGED GEKEGGFQRI YLHEEGVQGR GSILSLPGGD VPPGGEFVQA AALVSQPALY SKELLEQRAA GPAMMHPSEA
501: VAKGPRWADL FEPGVKHALF VGIGIQILQQ FAGINGVLYY TPQILEQAGV GVLLSNIGLS ASSASILISA LTTLLMLPSI GIAMRLMDMS GRRFLLLATI
601: PILIVALAIL VVVNIVDVGT MVHAALSTIS VIVYFCFFVM GFGPIPNILC AEIFPTTVRG ICIAICALTF WIGDIIVTYT LPVMLNAIGL AGVFGIYAVV
701: CILALVFVFI KVPETKGMPL EVITEFFSVG AKQAKEARED
001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
Arabidopsis Description
TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.