Factsheet for Os03t0823200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, mitochondrion, extracellular

Predictor Summary:

plastid 2
cytosol 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1
golgi 1
extracellular 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90617	Sorghum	plastid	75.0	14.34
TraesCS5D01G498200.1	Wheat	plastid	74.07	14.16
TraesCS5B01G498000.2	Wheat	mitochondrion, plastid	74.07	14.16
HORVU5Hr1G114020.2	Barley	plastid	75.0	14.14
TraesCS5A01G484700.1	Wheat	plastid	74.07	14.11
VIT_06s0004g05190.t01	Wine grape	golgi, mitochondrion, plasma membrane, plastid	63.89	13.61
Zm00001d012938_P002	Maize	plastid	75.93	13.2
GSMUA_Achr10P...	Banana	plastid	66.67	12.93
Bra002596.1-P	Field mustard	plastid	63.89	12.43
CDY54245	Canola	plastid	63.89	12.34
CDY33006	Canola	plastid	62.96	12.25
AT5G59250.1	Thale cress	plastid	62.04	12.01
KRH29747	Soybean	plastid	61.11	11.96
Os10t0579200-01	Rice	plasma membrane	55.56	11.95
KRH24741	Soybean	plastid	60.19	11.61
PGSC0003DMT400026885	Potato	plasma membrane	58.33	11.56
Solyc03g078000.2.1	Tomato	plastid	57.41	11.38
Os02t0832100-00	Rice	golgi, mitochondrion, plasma membrane, plastid	24.07	5.86
Os10t0539900-01	Rice	plasma membrane	29.63	4.32
Os11t0620400-01	Rice	plasma membrane	24.07	3.95
Os02t0229400-01	Rice	plasma membrane	26.85	3.89
Os11t0475600-01	Rice	plasma membrane	25.93	3.7
Os03t0823100-01	Rice	plasma membrane	4.63	1.65
Os03t0128932-00	Rice	nucleus	1.85	0.46
Os04t0654550-00	Rice	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

Gene3D:1.20.1250.20	MapMan:35.2	UniProt:A0A0P0W4Z9	ProteinID:BAS87119.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005351	GO:GO:0005355	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0008643
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600
InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	EnsemblPlantsGene:Os03g0823200	EnsemblPlants:Os03t0823200-01
PFAM:PF00083	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI0003938858	SEG:seg	:	:	:	:

Description

Similar to predicted protein. (Os03t0823200-01)

Coordinates

chr3:-:34556968..34559878

Molecular Weight (calculated)

11515.2 Da

IEP (calculated)

7.176

GRAVY (calculated)

0.888

Length

108 amino acids

Sequence
(BLAST)

001: WCLFLQSAEL SGTTWFSLSS IQLGLVASGS LYGALGGSLL AYRVADFLGR RIELVTAAAL YISGALVTGF APDFVLLIIG RLLYGIGIGL VSNSEATFFL
101: PKMQCHCY

Best Arabidopsis Sequence Match ( AT5G59250.1 )
(BLAST)

001: MAFAVSVQSH FAIRALKRDH FKNPSPRTFC SCFKSRPDSS YLSLKERTCF VSKPGLVTTR YRHIFQVGAE TGGEFADSGE VADSLASDAP ESFSWSSVIL
101: PFIFPALGGL LFGYDIGATS GATLSLQSPA LSGTTWFNFS PVQLGLVVSG SLYGALLGSI SVYGVADFLG RRRELIIAAV LYLLGSLITG CAPDLNILLV
201: GRLLYGFGIG LAMHGAPLYI AETCPSQIRG TLISLKELFI VLGILLGFSV GSFQIDVVGG WRYMYGFGTP VALLMGLGMW SLPASPRWLL LRAVQGKGQL
301: QEYKEKAMLA LSKLRGRPPG DKISEKLVDD AYLSVKTAYE DEKSGGNFLE VFQGPNLKAL TIGGGLVLFQ QITGQPSVLY YAGSILQTAG FSAAADATRV
401: SVIIGVFKLL MTWVAVAKVD DLGRRPLLIG GVSGIALSLF LLSAYYKFLG GFPLVAVGAL LLYVGCYQIS FGPISWLMVS EIFPLRTRGR GISLAVLTNF
501: GSNAIVTFAF SPLKEFLGAE NLFLLFGGIA LVSLLFVILV VPETKGLSLE EIESKILK

Arabidopsis Description

D-xylose-proton symporter-like 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WWW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.