Factsheet for Bra002596.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33006	Canola	plastid	99.82	99.82
AT5G59250.1	Thale cress	plastid	91.17	90.68
VIT_06s0004g05190.t01	Wine grape	golgi, mitochondrion, plasma membrane, plastid	72.61	79.49
Os03t0823100-01	Rice	plasma membrane	40.72	74.59
PGSC0003DMT400026885	Potato	plasma membrane	73.15	74.5
Solyc03g078000.2.1	Tomato	plastid	72.97	74.31
KRH29747	Soybean	plastid	72.61	73.01
KRH24741	Soybean	plastid	72.07	71.43
GSMUA_Achr10P...	Banana	plastid	68.29	68.04
EER90617	Sorghum	plastid	66.13	64.96
TraesCS5A01G484700.1	Wheat	plastid	65.41	64.02
TraesCS5D01G498200.1	Wheat	plastid	65.05	63.89
Os03t0823200-01	Rice	extracellular, mitochondrion, plasma membrane	12.43	63.89
HORVU5Hr1G114020.2	Barley	plastid	65.77	63.7
TraesCS5B01G498000.2	Wheat	mitochondrion, plastid	64.5	63.36
Zm00001d012938_P002	Maize	plastid	65.77	58.78
Bra021374.1-P	Field mustard	plasma membrane	52.25	57.65
Bra032018.1-P	Field mustard	plasma membrane	52.25	57.54
Bra023592.1-P	Field mustard	cytosol, plasma membrane, vacuole	53.69	55.49
Bra001072.1-P	Field mustard	plasma membrane	34.95	51.73
Bra011604.1-P	Field mustard	plasma membrane	28.29	21.22
Bra025848.1-P	Field mustard	plasma membrane	26.49	20.39
Bra016448.1-P	Field mustard	plasma membrane	25.95	19.83
Bra038902.1-P	Field mustard	plasma membrane	25.59	19.37
Bra036794.1-P	Field mustard	plasma membrane	25.59	19.09

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.2	EnsemblPlantsGene:Bra002596	EnsemblPlants:Bra002596.1	EnsemblPlants:Bra002596.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4CEG5	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500
PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix
UniParc:UPI000254393D	SEG:seg	:	:	:	:

Description

AT5G59250 (E=3e-249) | sugar transporter family protein

Coordinates

chrA10:-:8656341..8659073

Molecular Weight (calculated)

59192.1 Da

IEP (calculated)

9.126

GRAVY (calculated)

0.548

Length

555 amino acids

Sequence
(BLAST)

001: MAFAISTQSH FAIRPLQLNQ FKNSCPRAFL GSCFKPRPDS SYLRSKELPK LGLVPRHRQK FQVGVGTGGE LADSGEVADS VASDAPESFS WSSVILPFIF
101: PALGGLLFGY DIGATSGATL SLQSATLSGT TWFNLSPVQL GLVVSGSLYG ALLGSTLVYG IADFLGRRRE LIIAAGLYLL GSLITGCAPD LNVLLLGRLL
201: YGLGIGLAMH GAPLYIAETC PSQIRGTLIS LKELFIVLGI LLGFSVGSFE IDVVGGWRYM YGFGTPVALL MGLGMWSLPP SPRWLLLRAV QGKGALQEYK
301: DKAMVALSKL RGRPPGDKLS EKLVDDALLS VKTAYEDEEK SGGNFLEVFQ GPNLKALTIG GGLVLFQQIT GQPSVLYYAG SILQTAGFSA AADATRVSVI
401: IGVFKLLMTW VAVAKVDDLG RRPLLIGGVS GIAISLFLLS AYYKFLGGFP LVAVGALLLY VGCYQISFGP ISWLMVSEIF PLRTRGRGIS LAVLTNFGSN
501: AIVTFAFSPL KEYLGAENLF LLFGAIALVS LLFVVLVVPE TKGLSLEEIE SKILK

Best Arabidopsis Sequence Match ( AT5G59250.1 )
(BLAST)

001: MAFAVSVQSH FAIRALKRDH FKNPSPRTFC SCFKSRPDSS YLSLKERTCF VSKPGLVTTR YRHIFQVGAE TGGEFADSGE VADSLASDAP ESFSWSSVIL
101: PFIFPALGGL LFGYDIGATS GATLSLQSPA LSGTTWFNFS PVQLGLVVSG SLYGALLGSI SVYGVADFLG RRRELIIAAV LYLLGSLITG CAPDLNILLV
201: GRLLYGFGIG LAMHGAPLYI AETCPSQIRG TLISLKELFI VLGILLGFSV GSFQIDVVGG WRYMYGFGTP VALLMGLGMW SLPASPRWLL LRAVQGKGQL
301: QEYKEKAMLA LSKLRGRPPG DKISEKLVDD AYLSVKTAYE DEKSGGNFLE VFQGPNLKAL TIGGGLVLFQ QITGQPSVLY YAGSILQTAG FSAAADATRV
401: SVIIGVFKLL MTWVAVAKVD DLGRRPLLIG GVSGIALSLF LLSAYYKFLG GFPLVAVGAL LLYVGCYQIS FGPISWLMVS EIFPLRTRGR GISLAVLTNF
501: GSNAIVTFAF SPLKEFLGAE NLFLLFGGIA LVSLLFVILV VPETKGLSLE EIESKILK

Arabidopsis Description

D-xylose-proton symporter-like 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WWW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.