Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- mitochondrion 1
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- extracellular 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29502 | Canola | plasma membrane | 90.98 | 99.54 |
| CDY31497 | Canola | plasma membrane | 87.24 | 99.53 |
| Bra016448.1-P | Field mustard | plasma membrane | 91.54 | 90.91 |
| AT1G20840.2 | Thale cress | golgi, plasma membrane | 90.57 | 88.96 |
| KRH60881 | Soybean | endoplasmic reticulum | 67.27 | 65.72 |
| KRH51563 | Soybean | endoplasmic reticulum | 66.99 | 65.54 |
| VIT_18s0122g00850.t01 | Wine grape | plasma membrane | 64.63 | 62.97 |
| PGSC0003DMT400025886 | Potato | plasma membrane | 63.8 | 62.42 |
| Solyc04g082700.2.1 | Tomato | endoplasmic reticulum | 63.66 | 62.2 |
| Bra011604.1-P | Field mustard | plasma membrane | 62.14 | 60.54 |
| Bra038902.1-P | Field mustard | plasma membrane | 55.06 | 54.16 |
| Bra036794.1-P | Field mustard | plasma membrane | 53.81 | 52.15 |
| Bra032018.1-P | Field mustard | plasma membrane | 19.14 | 27.38 |
| Bra002596.1-P | Field mustard | plastid | 20.39 | 26.49 |
| Bra021374.1-P | Field mustard | plasma membrane | 18.45 | 26.44 |
| Bra001072.1-P | Field mustard | plasma membrane | 13.59 | 26.13 |
| Bra023592.1-P | Field mustard | cytosol, plasma membrane, vacuole | 19.42 | 26.07 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | EnsemblPlantsGene:Bra025848 | EnsemblPlants:Bra025848.1 | EnsemblPlants:Bra025848.1-P | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | UniProt:M4EAN9 | InterPro:MFS_dom | InterPro:MFS_sugar_transport-like |
| InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 | ScanProsite:PS00217 | PFscan:PS50850 |
| PANTHER:PTHR23500 | PANTHER:PTHR23500:SF180 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS | TMHMM:TMhelix |
| UniParc:UPI000253EFDB | SEG:seg | : | : | : | : |
Description
AT1G20840 (E=0.0) TMT1 | TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1); carbohydrate transmembrane transporter/ nucleoside transmembrane transporter/ sugar:hydrogen symporter
Coordinates
chrA06:-:8416680..8419455
Molecular Weight (calculated)
78019.0 Da
IEP (calculated)
5.131
GRAVY (calculated)
0.296
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGATLVALA ATIGNFLQGW DNATIAGAMV YINKDMNLAT SVQGLVVAMS LIGATVITTC SGPISDWLGR RPMLILASVM YFLSGLIMLW SPNVYVLCLA
101: RLLDGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDAPS WRAMLGVLSI PSLVYLLFTV FYLPESPRWL VSKGRMDEAK
201: KVLQMLCGRE DVTDEMALLV EGLDIGGEKT LEDLLVTLEE HETLETVDGD GQMRLLGTHE NQSYIARPVT DQQQSSLGLR SRHGSLANQS GIHKDPIVGL
301: FDSLHEKMPE AGGNTKSGIF PNFGSMFSTN ADVPHMKPAH WEKDVESQFN KDHDDYATDD NAPDDDSDND LRSPLMSRQA TSTDKDVIPH PTGGSTLSMR
401: RHSTLNGENS MGIGGGWHMG YRYDNGEYKR YYLKEDGAES RRGSIVSLPC GHDGGSYVHA SALVSRSVLG PKSVHGSDVA PPTGPLWSAL LEPGVKRALV
501: VGVGIQILQQ FSGINGVLYY TPQILERAGV DILLSSFGLS SISASFLISG LTTLLMLPAI VVAMRLMDVS GRRALLLWTI PVLIVSLVAL FISELVQISK
601: VVNAALSTVC VVLYICFFVM GYGPIPNILC SEIFPTRVRG LCIAICAMVF WICDIIVTYS LPVLLSSIGL VGVFSIYAAV CVISWVFVYL KVPETKGMPL
701: EVITDYFAFG AQASAPSKDD T
101: RLLDGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDAPS WRAMLGVLSI PSLVYLLFTV FYLPESPRWL VSKGRMDEAK
201: KVLQMLCGRE DVTDEMALLV EGLDIGGEKT LEDLLVTLEE HETLETVDGD GQMRLLGTHE NQSYIARPVT DQQQSSLGLR SRHGSLANQS GIHKDPIVGL
301: FDSLHEKMPE AGGNTKSGIF PNFGSMFSTN ADVPHMKPAH WEKDVESQFN KDHDDYATDD NAPDDDSDND LRSPLMSRQA TSTDKDVIPH PTGGSTLSMR
401: RHSTLNGENS MGIGGGWHMG YRYDNGEYKR YYLKEDGAES RRGSIVSLPC GHDGGSYVHA SALVSRSVLG PKSVHGSDVA PPTGPLWSAL LEPGVKRALV
501: VGVGIQILQQ FSGINGVLYY TPQILERAGV DILLSSFGLS SISASFLISG LTTLLMLPAI VVAMRLMDVS GRRALLLWTI PVLIVSLVAL FISELVQISK
601: VVNAALSTVC VVLYICFFVM GYGPIPNILC SEIFPTRVRG LCIAICAMVF WICDIIVTYS LPVLLSSIGL VGVFSIYAAV CVISWVFVYL KVPETKGMPL
701: EVITDYFAFG AQASAPSKDD T
001: MKGATLVALA ATIGNFLQGW DNATIAGAMV YINKDLNLPT SVQGLVVAMS LIGATVITTC SGPISDWLGR RPMLILSSVM YFVCGLIMLW SPNVYVLCFA
101: RLLNGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV FYLPESPRWL VSKGRMDEAK
201: RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV
301: NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL
401: SMRRHSTLMQ GNGESSMGIG GGWHMGYRYE NDEYKRYYLK EDGAESRRGS IISIPGGPDG GGSYIHASAL VSRSVLGPKS VHGSAMVPPE KIAASGPLWS
501: ALLEPGVKRA LVVGVGIQIL QQFSGINGVL YYTPQILERA GVDILLSSLG LSSISASFLI SGLTTLLMLP AIVVAMRLMD VSGRRSLLLW TIPVLIVSLV
601: VLVISELIHI SKVVNAALST GCVVLYFCFF VMGYGPIPNI LCSEIFPTRV RGLCIAICAM VFWIGDIIVT YSLPVLLSSI GLVGVFSIYA AVCVISWIFV
701: YMKVPETKGM PLEVITDYFA FGAQAQASAP SKDI
101: RLLNGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV FYLPESPRWL VSKGRMDEAK
201: RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV
301: NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL
401: SMRRHSTLMQ GNGESSMGIG GGWHMGYRYE NDEYKRYYLK EDGAESRRGS IISIPGGPDG GGSYIHASAL VSRSVLGPKS VHGSAMVPPE KIAASGPLWS
501: ALLEPGVKRA LVVGVGIQIL QQFSGINGVL YYTPQILERA GVDILLSSLG LSSISASFLI SGLTTLLMLP AIVVAMRLMD VSGRRSLLLW TIPVLIVSLV
601: VLVISELIHI SKVVNAALST GCVVLYFCFF VMGYGPIPNI LCSEIFPTRV RGLCIAICAM VFWIGDIIVT YSLPVLLSSI GLVGVFSIYA AVCVISWIFV
701: YMKVPETKGM PLEVITDYFA FGAQAQASAP SKDI
Arabidopsis Description
MSSP1TMT1 [Source:UniProtKB/TrEMBL;Acc:A0A178W059]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.