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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 3
  • plasma membrane 5
  • endoplasmic reticulum 2
  • vacuole 2
  • extracellular 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 nucleus: 25724727
endoplasmic reticulum: 27224218
msms PMID: 25724727 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan; National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan; National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan. Electronic address: skomatsu@affrc.go.jp.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH60881 Soybean endoplasmic reticulum 98.51 98.37
VIT_18s0122g00850.t01 Wine grape plasma membrane 79.1 78.78
PGSC0003DMT400025886 Potato plasma membrane 76.53 76.53
Solyc04g082700.2.1 Tomato endoplasmic reticulum 76.39 76.29
KRH14010 Soybean plasma membrane 68.79 75.67
KRH74104 Soybean plasma membrane 72.32 74.96
KRH51319 Soybean nucleus, plasma membrane 74.63 74.53
KRH60612 Soybean plasma membrane 73.81 74.11
CDY31497 Canola plasma membrane 60.11 70.09
CDY29502 Canola plasma membrane 61.87 69.2
CDY33650 Canola plasma membrane 64.45 68.15
AT1G20840.2 Thale cress golgi, plasma membrane 67.3 67.57
CDX96618 Canola plasma membrane 66.08 67.17
Bra025848.1-P Field mustard plasma membrane 65.54 66.99
Bra016448.1-P Field mustard plasma membrane 65.94 66.94
KRH28946 Soybean plasma membrane 52.51 53.6
KRH07812 Soybean plasma membrane 49.53 53.28
KRH76516 Soybean plasma membrane 53.32 52.82
KRH24040 Soybean plasma membrane 19.95 29.58
KRH29016 Soybean plasma membrane 19.95 29.34
KRH29747 Soybean plastid 19.67 26.27
KRH24741 Soybean plastid 19.95 26.25
Protein Annotations
Gene3D:1.20.1250.20EntrezGene:100811857MapMan:24.2.2.1.4EMBL:ACUP02003380EnsemblPlantsGene:GLYMA_06G015000GO:GO:0003674
GO:GO:0005215GO:GO:0005351GO:GO:0005355GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015992GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0035428GO:GO:0046323
GO:GO:0055085GO:GO:1902600GO:GO:1904659InterPro:IPR020846UniProt:K7KSH9EnsemblPlants:KRH51563
ProteinID:KRH51563ProteinID:KRH51563.1ProteinID:KRH51564.1InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500
PANTHER:PTHR23500:SF180SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTMHMM:TMhelixUniParc:UPI0002339E81
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:+:1127434..1132895
Molecular Weight (calculated)
78861.4 Da
IEP (calculated)
5.472
GRAVY (calculated)
0.369
Length
737 amino acids
Sequence
(BLAST)
001: MKGAVLVAIA ASIGNFLQGW DNATIAGAIV YIKKDLALET TMEGLVVAMS LIGATVITTC SGPVADWLGR RPMMIISSVL YFLGGLVMLW SPNVYVLCLA
101: RLLDGFGIGL AVTLVPVYIS ETAPSEIRGS LNTLPQFSGS GGMFLSYCMV FGMSLSPAPS WRLMLGVLSI PSLLYFALTI FFLPESPRWL VSKGRMLEAK
201: KVLQRLRGRE DVSGEMALLV EGLGIGGDTS IEEYIIGPAD KVADGHEHAT EKDKIRLYGS QAGLSWLAKP VTGQSSIGLA SRHGSIINQS MPLMDPLVTL
301: FGSIHEKLPE TGAGGSMRST LFPNFGSMFS TAEPHVKNEQ WDEESLQREG EDYMSDAADG DSDDNLHSPL ISRQTTSLEK DLPPPPSHGS ILGSMRRHSS
401: LMQGSGEQGG STGIGGGWQL AWKWTDKDED GKHQGGFKRI YLHEEGVSAS HRGSIVSIPG EGEFVQAAAL VSQPALYSKE LIDGHPVGPA MVHPSETASK
501: GPSWKALLEP GVKHALIVGV GIQILQQFSG INGVLYYTPQ ILEEAGVEVL LSDIGIGSES ASFLISAFTT FLMLPCIGVA MKLMDVSGRR QLLLTTIPVL
601: IVSLIILVIG SLVNFGNVAH AAISTVCVVV YFCCFVMGYG PIPNILCSEI FPTRVRGLCI AICALVFWIG DIIITYSLPV MLSSLGLGGV FAIYAVVCFI
701: SWIFVFLKVP ETKGMPLEVI SEFFSVGAKQ AASAKNE
Best Arabidopsis Sequence Match ( AT4G35300.4 )
(BLAST)
001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
Arabidopsis Description
TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.