Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 5
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- extracellular 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96618 | Canola | plasma membrane | 99.59 | 99.72 |
| Bra025848.1-P | Field mustard | plasma membrane | 90.91 | 91.54 |
| AT1G20840.2 | Thale cress | golgi, plasma membrane | 91.87 | 90.87 |
| KRH60881 | Soybean | endoplasmic reticulum | 67.22 | 66.12 |
| KRH51563 | Soybean | endoplasmic reticulum | 66.94 | 65.94 |
| VIT_18s0122g00850.t01 | Wine grape | plasma membrane | 65.15 | 63.92 |
| PGSC0003DMT400025886 | Potato | plasma membrane | 63.91 | 62.96 |
| Solyc04g082700.2.1 | Tomato | endoplasmic reticulum | 63.91 | 62.87 |
| Bra011604.1-P | Field mustard | plasma membrane | 62.81 | 61.62 |
| Bra038902.1-P | Field mustard | plasma membrane | 54.68 | 54.16 |
| Bra036794.1-P | Field mustard | plasma membrane | 53.86 | 52.55 |
| Bra032018.1-P | Field mustard | plasma membrane | 18.87 | 27.18 |
| Bra021374.1-P | Field mustard | plasma membrane | 18.18 | 26.24 |
| Bra001072.1-P | Field mustard | plasma membrane | 13.5 | 26.13 |
| Bra002596.1-P | Field mustard | plastid | 19.83 | 25.95 |
| Bra023592.1-P | Field mustard | cytosol, plasma membrane, vacuole | 19.01 | 25.7 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | EnsemblPlantsGene:Bra016448 | EnsemblPlants:Bra016448.1 | EnsemblPlants:Bra016448.1-P | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | UniProt:M4DIX1 | InterPro:MFS_dom | InterPro:MFS_sugar_transport-like |
| InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 | ScanProsite:PS00217 | PFscan:PS50850 |
| PANTHER:PTHR23500 | PANTHER:PTHR23500:SF180 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS | TMHMM:TMhelix |
| UniParc:UPI000254698E | SEG:seg | : | : | : | : |
Description
AT1G20840 (E=0.0) TMT1 | TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1); carbohydrate transmembrane transporter/ nucleoside transmembrane transporter/ sugar:hydrogen symporter
Coordinates
chrA08:+:18524895..18527677
Molecular Weight (calculated)
78964.4 Da
IEP (calculated)
5.234
GRAVY (calculated)
0.283
Length
726 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGATLVALA ATIGNFLQGW DNATIAGAMV YINKDMNLPT SVQGLVVAMS LIGATVITTC SGPISDWLGR RPMLILSSVM YFLSGLIMWW SPSVYVLCLA
101: RLLDGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSEAPS WRGMLGVLSI PSLVYLFFTV FYLPESPRWL VSKGRMDEAK
201: KVLQQLCGRE DVTDEMALLV EGLDIGGEKT LEDLLVTLDD HETLETVNED GQMRLLGTHE NQSYIARPVP EQQSSLFLRS RHGSLANQSM ILKDPLVGLF
301: DSLHEKMVPE AAGGNTRSGI FPHFGSMFST NADGKPPHWE KDVESQFNKD HDDYATDDNA ADDDSDNDLR SPLMSRQTTS MDKDMIPHPT GGSTLSMRRH
401: STLTGETNMG IGNGWHMGYR YDNGEYKRYY LKEDNAESRR GSIISLPGGQ DGGSSYIHAS ALVSKSVLGP KSIHGSAMVP PEKTATTGPL WSALLEPGVK
501: RALVVGVGIQ ILQQFSGING VLYYTPQILE RAGVDILLSS FGLSSISASF LISGLTTLLM LPSIVVAMRL MDVSGRRALL LWTIPVLILS LIVLVISELV
601: HISKVVNAAL STACVILYFC FFVMGYGPIP NILCSEIFPT RVRGLCIAIC AMVFWIGDII VTYSLPVLLS SIGLVGVFII YGAVCVISWI FVYMKVPETK
701: GMPLEVITDY FAFGAQAQAS APSKDI
101: RLLDGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSEAPS WRGMLGVLSI PSLVYLFFTV FYLPESPRWL VSKGRMDEAK
201: KVLQQLCGRE DVTDEMALLV EGLDIGGEKT LEDLLVTLDD HETLETVNED GQMRLLGTHE NQSYIARPVP EQQSSLFLRS RHGSLANQSM ILKDPLVGLF
301: DSLHEKMVPE AAGGNTRSGI FPHFGSMFST NADGKPPHWE KDVESQFNKD HDDYATDDNA ADDDSDNDLR SPLMSRQTTS MDKDMIPHPT GGSTLSMRRH
401: STLTGETNMG IGNGWHMGYR YDNGEYKRYY LKEDNAESRR GSIISLPGGQ DGGSSYIHAS ALVSKSVLGP KSIHGSAMVP PEKTATTGPL WSALLEPGVK
501: RALVVGVGIQ ILQQFSGING VLYYTPQILE RAGVDILLSS FGLSSISASF LISGLTTLLM LPSIVVAMRL MDVSGRRALL LWTIPVLILS LIVLVISELV
601: HISKVVNAAL STACVILYFC FFVMGYGPIP NILCSEIFPT RVRGLCIAIC AMVFWIGDII VTYSLPVLLS SIGLVGVFII YGAVCVISWI FVYMKVPETK
701: GMPLEVITDY FAFGAQAQAS APSKDI
001: MKGATLVALA ATIGNFLQGW DNATIAGAMV YINKDLNLPT SVQGLVVAMS LIGATVITTC SGPISDWLGR RPMLILSSVM YFVCGLIMLW SPNVYVLCFA
101: RLLNGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV FYLPESPRWL VSKGRMDEAK
201: RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV
301: NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL
401: SMRRHSTLMQ GNGESSMGIG GGWHMGYRYE NDEYKRYYLK EDGAESRRGS IISIPGGPDG GGSYIHASAL VSRSVLGPKS VHGSAMVPPE KIAASGPLWS
501: ALLEPGVKRA LVVGVGIQIL QQFSGINGVL YYTPQILERA GVDILLSSLG LSSISASFLI SGLTTLLMLP AIVVAMRLMD VSGRRSLLLW TIPVLIVSLV
601: VLVISELIHI SKVVNAALST GCVVLYFCFF VMGYGPIPNI LCSEIFPTRV RGLCIAICAM VFWIGDIIVT YSLPVLLSSI GLVGVFSIYA AVCVISWIFV
701: YMKVPETKGM PLEVITDYFA FGAQAQASAP SKDI
101: RLLNGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV FYLPESPRWL VSKGRMDEAK
201: RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV
301: NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL
401: SMRRHSTLMQ GNGESSMGIG GGWHMGYRYE NDEYKRYYLK EDGAESRRGS IISIPGGPDG GGSYIHASAL VSRSVLGPKS VHGSAMVPPE KIAASGPLWS
501: ALLEPGVKRA LVVGVGIQIL QQFSGINGVL YYTPQILERA GVDILLSSLG LSSISASFLI SGLTTLLMLP AIVVAMRLMD VSGRRSLLLW TIPVLIVSLV
601: VLVISELIHI SKVVNAALST GCVVLYFCFF VMGYGPIPNI LCSEIFPTRV RGLCIAICAM VFWIGDIIVT YSLPVLLSSI GLVGVFSIYA AVCVISWIFV
701: YMKVPETKGM PLEVITDYFA FGAQAQASAP SKDI
Arabidopsis Description
MSSP1TMT1 [Source:UniProtKB/TrEMBL;Acc:A0A178W059]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.