Factsheet for Bra032018.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43152	Canola	cytosol, plasma membrane, vacuole	98.61	98.61
Bra021374.1-P	Field mustard	plasma membrane	92.26	92.45
AT3G03090.1	Thale cress	plasma membrane	88.69	88.87
Bra001072.1-P	Field mustard	plasma membrane	64.48	86.67
Bra023592.1-P	Field mustard	cytosol, plasma membrane, vacuole	79.56	74.67
VIT_16s0039g02170.t01	Wine grape	plasma membrane	71.63	72.2
KRH29016	Soybean	plasma membrane	70.83	71.26
KRH24040	Soybean	plasma membrane	69.64	70.62
Solyc03g096950.2.1	Tomato	plasma membrane	67.86	67.99
PGSC0003DMT400001526	Potato	plasma membrane	67.86	67.99
GSMUA_Achr11P...	Banana	plasma membrane	65.67	66.47
TraesCS1A01G197200.1	Wheat	plasma membrane	64.29	65.45
TraesCS1D01G200700.1	Wheat	plasma membrane	64.29	65.45
TraesCS1B01G211800.1	Wheat	plasma membrane	64.09	65.25
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	64.48	64.74
Os10t0579200-01	Rice	plasma membrane	64.29	64.54
EER91860	Sorghum	plasma membrane	62.9	62.04
Zm00001d014435_P004	Maize	plasma membrane	63.69	59.23
Bra002596.1-P	Field mustard	plastid	57.54	52.25
Bra011604.1-P	Field mustard	plasma membrane	29.76	20.27
Bra025848.1-P	Field mustard	plasma membrane	27.38	19.14
Bra016448.1-P	Field mustard	plasma membrane	27.18	18.87
Bra038902.1-P	Field mustard	plasma membrane	26.59	18.28
Bra036794.1-P	Field mustard	plasma membrane	26.79	18.15

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.2	EnsemblPlantsGene:Bra032018	EnsemblPlants:Bra032018.1	EnsemblPlants:Bra032018.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4ET88	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879
TMHMM:TMhelix	UniParc:UPI000254615B	SEG:seg	:	:	:

Description

AT3G03090 (E=5e-230) AtVGT1 | AtVGT1 (Arabidopsis thaliana vacuolar glucose transporter 1); carbohydrate transmembrane transporter/ fructose transmembrane transporter/ glucose transmembrane transporter/ sugar:hydrogen symporter

Coordinates

chrA02:-:26641104..26644145

Molecular Weight (calculated)

53754.9 Da

IEP (calculated)

8.012

GRAVY (calculated)

0.718

Length

504 amino acids

Sequence
(BLAST)

001: MGFDAEKQSI VSVEGQVGDS SSGEISSEKQ PLIKENHHSP ENYSVLAAIP PFLFPALGAL LFGYEIGATS CATISIKSPK LSGISWYNLS SVDVGIITSG
101: SLYGALIGSI VAFSAADIIG RRKELILAAF LYLVGAIVTA VAPVFSVLII GRLMYGIGVG LTMHAAPMYI AETAPSQIRG RMISLKEFFT VLGMVGGYGI
201: GSLWVTVTSG WRYMYATIIP LPVIMGVGMC WLPESPRWLL LRSLQGKGNV ESLQQAAIKS LRRLRGSVVV DSAAEQVNEI LAELSSVGED REATLGELFQ
301: GKCLKALTIA GGLVLLQQIT GQPSVLYYAP SILQTAGFSA ATDATRISIL LGLLKLVMTG VAVIVIDRLG RRPLLLGGVS GMMISLFLLG SYYIFYNTVP
401: AVAVVALLLY VGCYQLSFGP IGWLMISEIF PLKLRGRGIS IAVLVNFGTN ALVTFAFSPL KELLGAGVLF CGFGVICVVS LFFIYFIVPE TKGLTLEEIE
501: SKCL

Best Arabidopsis Sequence Match ( AT3G03090.1 )
(BLAST)

001: MGFDPENQSI SSVGQVVGDS SSGGITAEKE PLLKENHSPE NYSVLAAIPP FLFPALGALL FGYEIGATSC AIMSLKSPTL SGISWYDLSS VDVGIITSGS
101: LYGALIGSIV AFSVADIIGR RKELILAAFL YLVGAIVTVV APVFSILIIG RVTYGMGIGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV LGMVGGYGIG
201: SLWITVISGW RYMYATILPF PVIMGTGMCW LPASPRWLLL RALQGQGNGE NLQQAAIRSL CRLRGSVIAD SAAEQVNEIL AELSLVGEDK EATFGELFRG
301: KCLKALTIAG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA ADATRISILL GLLKLVMTGV SVIVIDRVGR RPLLLCGVSG MVISLFLLGS YYMFYKNVPA
401: VAVAALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISL AVLVNFGANA LVTFAFSPLK ELLGAGILFC AFGVICVVSL FFIYYIVPET KGLTLEEIEA
501: KCL

Arabidopsis Description

AtVGT1D-xylose-proton symporter-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Z8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.