CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29016	Soybean	plasma membrane	95.17	94.41
VIT_16s0039g02170.t01	Wine grape	plasma membrane	76.66	76.2
AT5G17010.4	Thale cress	plasma membrane	75.05	74.16
CDX85478	Canola	plasma membrane	74.65	73.47
CDY38076	Canola	cytosol, plasma membrane, vacuole	73.64	72.91
Solyc03g096950.2.1	Tomato	plasma membrane	73.24	72.37
PGSC0003DMT400001526	Potato	plasma membrane	73.04	72.17
GSMUA_Achr11P...	Banana	plasma membrane	71.03	70.88
CDY28736	Canola	cytosol, plasma membrane, vacuole	71.63	70.78
CDX92030	Canola	plasma membrane	70.83	70.12
Bra021374.1-P	Field mustard	plasma membrane	70.83	69.98
CDY23466	Canola	plasma membrane	70.83	69.98
AT3G03090.1	Thale cress	plasma membrane	70.62	69.78
CDY43152	Canola	cytosol, plasma membrane, vacuole	70.62	69.64
Bra032018.1-P	Field mustard	plasma membrane	70.62	69.64
CDY49922	Canola	plasma membrane	70.42	69.58
Os10t0579200-01	Rice	plasma membrane	70.02	69.32
CDX74227	Canola	cytosol, plasma membrane, vacuole	67.2	69.15
Bra023592.1-P	Field mustard	cytosol, plasma membrane, vacuole	74.65	69.09
TraesCS1B01G211800.1	Wheat	plasma membrane	68.61	68.89
TraesCS1D01G200700.1	Wheat	plasma membrane	68.41	68.69
TraesCS1A01G197200.1	Wheat	plasma membrane	68.21	68.48
Bra001072.1-P	Field mustard	plasma membrane	51.11	67.73
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	68.41	67.73
CDX92028	Canola	cytosol, mitochondrion, peroxisome, vacuole	64.99	67.29
EER91860	Sorghum	plasma membrane	67.61	65.75
Zm00001d014435_P004	Maize	plasma membrane	67.61	61.99
KRH29747	Soybean	plastid	62.37	56.16
KRH24741	Soybean	plastid	61.57	54.64
CDY47336	Canola	golgi, plasma membrane	27.16	51.72
KRH74104	Soybean	plasma membrane	29.18	20.39
KRH14010	Soybean	plasma membrane	27.36	20.3
KRH51563	Soybean	endoplasmic reticulum	29.58	19.95
KRH07812	Soybean	plasma membrane	27.36	19.85
KRH60881	Soybean	endoplasmic reticulum	29.38	19.78
KRH51319	Soybean	nucleus, plasma membrane	29.18	19.65
KRH60612	Soybean	plasma membrane	28.77	19.48
KRH28946	Soybean	plasma membrane	28.17	19.39
KRH76516	Soybean	plasma membrane	27.97	18.68

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100785992	MapMan:24.2.2.1.2	EMBL:ACUP02007166	EnsemblPlantsGene:GLYMA_12G018200	GO:GO:0003674
GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035428	GO:GO:0046323
GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	UniProt:I1LP81	InterPro:IPR020846	EnsemblPlants:KRH24040
ProteinID:KRH24040	ProteinID:KRH24040.1	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	ScanProsite:PS00216	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	SUPFAM:SSF103473
InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI000233D1BB	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:1271081..1279796

Molecular Weight (calculated)

52901.6 Da

IEP (calculated)

7.327

GRAVY (calculated)

0.756

Length

497 amino acids

Sequence
(BLAST)

001: MAFDPVQPVA KKARSGGEIV SAREPLLNGV HDSESYSVSA AILPFLFPAL GGLLFGYDIG ATSSATISIE SPTLSGVSWY KLSSVEIGLL TSGSLYGALI
101: GSVLAFNVAD FLGRRKELIG SAVVYLVGAL VTALAPNFPV LVLGRLVFGT GIGLAMHAAP MYIAETAPTP IRGQLISLKE FFIVLGMVAG YGIGSLFVET
201: VAGWRYMYGV SSPMAIIMGL GMWWLPASPR WLLLRAIQGK GDVQNSKDIV IRSLCQLQGQ AFNDSIPWQV DEILAELSYL GEEKEATFGE LFQGKCLKAL
301: WIGAGLVLFQ QITGQPSVLY YAGSIFQSAG FSGASDATRV SILLGVFKLI MTGVAVVVVD KLGRRPLLLG GVSGIVISLF FLGSYYIFLD NTPVVAVVGL
401: LLYVGSYQIS FGPIGWLMIA EIFPLRLRGR GLSIAVLVNF GANALVTFAF SPLKALLGAG ILFYTFGVIA VTSLVFIYLV IPETKGLTLE EIEAKCL

Best Arabidopsis Sequence Match ( AT5G17010.4 )
(BLAST)

001: MALDPEQQQP ISSVSREFGK SSGEISPERE PLIKENHVPE NYSVVAAILP FLFPALGGLL YGYEIGATSC ATISLQSPSL SGISWYNLSS VDVGLVTSGS
101: LYGALFGSIV AFTIADVIGR RKELILAALL YLVGALVTAL APTYSVLIIG RVIYGVSVGL AMHAAPMYIA ETAPSPIRGQ LVSLKEFFIV LGMVGGYGIG
201: SLTVNVHSGW RYMYATSVPL AVIMGIGMWW LPASPRWLLL RVIQGKGNVE NQREAAIKSL CCLRGPAFVD SAAEQVNEIL AELTFVGEDK EVTFGELFQG
301: KCLKALIIGG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA GDATRVSILL GLLKLIMTGV AVVVIDRLGR RPLLLGGVGG MVVSLFLLGS YYLFFSASPV
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGLSL AVLVNFGANA LVTFAFSPLK ELLGAGILFC GFGVICVLSL VFIFFIVPET KGLTLEEIEA
501: KCL

Arabidopsis Description

D-xylose-proton symporter-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.