CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24741	Soybean	plastid	95.83	94.46
VIT_06s0004g05190.t01	Wine grape	golgi, mitochondrion, plasma membrane, plastid	74.64	81.26
Solyc03g078000.2.1	Tomato	plastid	72.46	73.39
PGSC0003DMT400026885	Potato	plasma membrane	72.1	73.03
CDY54245	Canola	plastid	73.73	72.81
Bra002596.1-P	Field mustard	plastid	73.01	72.61
CDY33006	Canola	plastid	72.83	72.43
Os03t0823100-01	Rice	plasma membrane	39.67	72.28
AT5G59250.1	Thale cress	plastid	72.46	71.68
GSMUA_Achr10P...	Banana	plastid	70.11	69.48
EER90617	Sorghum	plastid	65.94	64.42
KRH29016	Soybean	plasma membrane	57.25	63.07
KRH24040	Soybean	plasma membrane	56.16	62.37
Os03t0823200-01	Rice	extracellular, mitochondrion, plasma membrane	11.96	61.11
TraesCS5D01G498200.1	Wheat	plastid	62.14	60.71
TraesCS5A01G484700.1	Wheat	plastid	62.32	60.67
TraesCS5B01G498000.2	Wheat	mitochondrion, plastid	61.59	60.18
HORVU5Hr1G114020.2	Barley	plastid	62.14	59.86
Zm00001d012938_P002	Maize	plastid	64.86	57.65
KRH14010	Soybean	plasma membrane	25.0	20.6
KRH74104	Soybean	plasma membrane	26.45	20.53
KRH07812	Soybean	plasma membrane	25.36	20.44
KRH51319	Soybean	nucleus, plasma membrane	26.99	20.19
KRH60612	Soybean	plasma membrane	26.63	20.03
KRH51563	Soybean	endoplasmic reticulum	26.27	19.67
KRH60881	Soybean	endoplasmic reticulum	26.27	19.65
KRH28946	Soybean	plasma membrane	24.82	18.98
KRH76516	Soybean	plasma membrane	25.18	18.68

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100800071	MapMan:24.2.2.1.2	UniProt:A0A0R4J4D4	EMBL:ACUP02006818	EnsemblPlantsGene:GLYMA_11G136200
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0022891	GO:GO:0055085	InterPro:IPR020846	EnsemblPlants:KRH29747
ProteinID:KRH29747	ProteinID:KRH29747.1	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF159
SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI000189D724
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:10352302..10356496

Molecular Weight (calculated)

59437.3 Da

IEP (calculated)

9.646

GRAVY (calculated)

0.543

Length

552 amino acids

Sequence
(BLAST)

001: MASTTLFSFR LSLNPLHHQQ TTRPKSLLSS PRTNPRLVSS INNHLALTRV TYPLLQSHSA PKRRFHVYSD GESSESLVSD ATYQEEFSWS SVILPFLFPA
101: LGGLLFGYDI GATSGATISL QSPELSGISW FKLSAIQLGL VVSGSLYGAL LGSLVAFAIA DFLGRKKQLI TAALLYLFGG VITAYAPELG VLLAGRLLYG
201: LGIGLAMHGA PLYIAETCPS QIRGTLVSLK ELFIVLGILL GYFVGSFLIE TVGGWRFMYG FSAPVAVLMG LGMLTLPNSP RWLLLRAVQG KGSFQDLKEK
301: AIFSLSKLRG RPPGDKESER QVEETLVSLK SAYADKESEG NFLEVFQGPN LKAFIIGGGL VLFQQITGQP SVLYYAGPIL QSAGFSAASD ATKVSVVIGL
401: FKLLMTWIAV LKVDDLGRRP LLIGGVSGIA LSLVLLSAYY KFLGGFPLVA VGALLLYVGC YQISFGPISW LMVSEVFPLR TRGKGISLAV LTNFASNAVV
501: TFAFSPLKEF LGAENLFLLF GAIAILSLLF IIFSVPETKG LSLEDIESKI LK

Best Arabidopsis Sequence Match ( AT5G59250.1 )
(BLAST)

001: MAFAVSVQSH FAIRALKRDH FKNPSPRTFC SCFKSRPDSS YLSLKERTCF VSKPGLVTTR YRHIFQVGAE TGGEFADSGE VADSLASDAP ESFSWSSVIL
101: PFIFPALGGL LFGYDIGATS GATLSLQSPA LSGTTWFNFS PVQLGLVVSG SLYGALLGSI SVYGVADFLG RRRELIIAAV LYLLGSLITG CAPDLNILLV
201: GRLLYGFGIG LAMHGAPLYI AETCPSQIRG TLISLKELFI VLGILLGFSV GSFQIDVVGG WRYMYGFGTP VALLMGLGMW SLPASPRWLL LRAVQGKGQL
301: QEYKEKAMLA LSKLRGRPPG DKISEKLVDD AYLSVKTAYE DEKSGGNFLE VFQGPNLKAL TIGGGLVLFQ QITGQPSVLY YAGSILQTAG FSAAADATRV
401: SVIIGVFKLL MTWVAVAKVD DLGRRPLLIG GVSGIALSLF LLSAYYKFLG GFPLVAVGAL LLYVGCYQIS FGPISWLMVS EIFPLRTRGR GISLAVLTNF
501: GSNAIVTFAF SPLKEFLGAE NLFLLFGGIA LVSLLFVILV VPETKGLSLE EIESKILK

Arabidopsis Description

D-xylose-proton symporter-like 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WWW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.