Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- endoplasmic reticulum 1
- plasma membrane 2
- vacuole 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92030 | Canola | plasma membrane | 67.82 | 35.26 |
| CDX92028 | Canola | cytosol, mitochondrion, peroxisome, vacuole | 63.6 | 34.58 |
| CDY43152 | Canola | cytosol, plasma membrane, vacuole | 65.52 | 33.93 |
| CDY28736 | Canola | cytosol, plasma membrane, vacuole | 64.75 | 33.6 |
| CDX74227 | Canola | cytosol, plasma membrane, vacuole | 61.3 | 33.13 |
| CDY49922 | Canola | plasma membrane | 62.84 | 32.6 |
| CDY23466 | Canola | plasma membrane | 62.84 | 32.6 |
| AT3G03090.1 | Thale cress | plasma membrane | 61.3 | 31.81 |
| CDY38076 | Canola | cytosol, plasma membrane, vacuole | 55.56 | 28.88 |
| CDX85478 | Canola | plasma membrane | 55.56 | 28.71 |
| KRH29016 | Soybean | plasma membrane | 52.87 | 27.54 |
| VIT_16s0039g02170.t01 | Wine grape | plasma membrane | 52.49 | 27.4 |
| KRH24040 | Soybean | plasma membrane | 51.72 | 27.16 |
| Solyc03g096950.2.1 | Tomato | plasma membrane | 49.04 | 25.45 |
| PGSC0003DMT400001526 | Potato | plasma membrane | 49.04 | 25.45 |
| TraesCS1A01G197200.1 | Wheat | plasma membrane | 47.89 | 25.25 |
| TraesCS1B01G211800.1 | Wheat | plasma membrane | 47.89 | 25.25 |
| TraesCS1D01G200700.1 | Wheat | plasma membrane | 47.89 | 25.25 |
| Os10t0579200-01 | Rice | plasma membrane | 48.28 | 25.1 |
| HORVU1Hr1G051290.3 | Barley | peroxisome, plasma membrane | 47.89 | 24.9 |
| GSMUA_Achr11P... | Banana | plasma membrane | 46.36 | 24.3 |
| EER91860 | Sorghum | plasma membrane | 45.59 | 23.29 |
| Zm00001d014435_P004 | Maize | plasma membrane | 45.59 | 21.96 |
| CDY54245 | Canola | plastid | 42.91 | 20.04 |
| CDY33006 | Canola | plastid | 42.53 | 20.0 |
| CDY33275 | Canola | extracellular, golgi, vacuole | 6.9 | 15.13 |
| CDY65623 | Canola | plasma membrane | 24.52 | 9.48 |
| CDX69128 | Canola | plasma membrane | 24.14 | 9.22 |
| CDX75492 | Canola | plasma membrane | 25.29 | 8.92 |
| CDY31497 | Canola | plasma membrane | 21.07 | 8.7 |
| CDY33276 | Canola | plasma membrane | 21.84 | 8.53 |
| CDX78009 | Canola | plasma membrane | 21.84 | 8.52 |
| CDY16303 | Canola | plasma membrane | 21.84 | 8.51 |
| CDY29502 | Canola | plasma membrane | 21.07 | 8.35 |
| CDX73717 | Canola | plasma membrane | 21.46 | 8.22 |
| CDY33650 | Canola | plasma membrane | 20.31 | 7.6 |
| CDX96618 | Canola | plasma membrane | 21.07 | 7.59 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:35.1 | GO:A0A078IBX1 | UniProt:A0A078IBX1 | EnsemblPlants:CDY47336 | ProteinID:CDY47336 |
| ProteinID:CDY47336.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00087189001 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PFscan:PS50850 | PANTHER:PTHR23500 |
| PANTHER:PTHR23500:SF159 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0004EE9524 | : | : |
Description
BnaCnng14730DBnaCnng14730D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078IBX1]
Coordinates
chrLK032710:+:1..2867
Molecular Weight (calculated)
28783.3 Da
IEP (calculated)
6.760
GRAVY (calculated)
0.452
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: FFDSFYFMEK YCIFEIGISD FSCRKKKNFA YNFVQTSCSH YGALNGSIVA FNIADIIGLK ELVTAAFLYL VGAILTATAP VFPVLISGRV VYGIGLGLTM
101: HAAPIYIAET APSQIHGWMI SLKEFTTVFG MVGGCGIGSL WITVVSGWRY MYATVILIPV TSFPYRWLLL LRSLQGKEDV ESLQQEEIKS LRRLKRVTAV
201: DTAAEQVDEI LAELSSVGED KEATISELFQ GKCLKALTIA GGLVLFQQVS AVISLNVRKE Q
101: HAAPIYIAET APSQIHGWMI SLKEFTTVFG MVGGCGIGSL WITVVSGWRY MYATVILIPV TSFPYRWLLL LRSLQGKEDV ESLQQEEIKS LRRLKRVTAV
201: DTAAEQVDEI LAELSSVGED KEATISELFQ GKCLKALTIA GGLVLFQQVS AVISLNVRKE Q
001: MGFDPENQSI SSVGQVVGDS SSGGITAEKE PLLKENHSPE NYSVLAAIPP FLFPALGALL FGYEIGATSC AIMSLKSPTL SGISWYDLSS VDVGIITSGS
101: LYGALIGSIV AFSVADIIGR RKELILAAFL YLVGAIVTVV APVFSILIIG RVTYGMGIGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV LGMVGGYGIG
201: SLWITVISGW RYMYATILPF PVIMGTGMCW LPASPRWLLL RALQGQGNGE NLQQAAIRSL CRLRGSVIAD SAAEQVNEIL AELSLVGEDK EATFGELFRG
301: KCLKALTIAG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA ADATRISILL GLLKLVMTGV SVIVIDRVGR RPLLLCGVSG MVISLFLLGS YYMFYKNVPA
401: VAVAALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISL AVLVNFGANA LVTFAFSPLK ELLGAGILFC AFGVICVVSL FFIYYIVPET KGLTLEEIEA
501: KCL
101: LYGALIGSIV AFSVADIIGR RKELILAAFL YLVGAIVTVV APVFSILIIG RVTYGMGIGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV LGMVGGYGIG
201: SLWITVISGW RYMYATILPF PVIMGTGMCW LPASPRWLLL RALQGQGNGE NLQQAAIRSL CRLRGSVIAD SAAEQVNEIL AELSLVGEDK EATFGELFRG
301: KCLKALTIAG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA ADATRISILL GLLKLVMTGV SVIVIDRVGR RPLLLCGVSG MVISLFLLGS YYMFYKNVPA
401: VAVAALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISL AVLVNFGANA LVTFAFSPLK ELLGAGILFC AFGVICVVSL FFIYYIVPET KGLTLEEIEA
501: KCL
Arabidopsis Description
AtVGT1D-xylose-proton symporter-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Z8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.