Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- endoplasmic reticulum 1
- plasma membrane 2
- vacuole 2
- golgi 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43152 | Canola | cytosol, plasma membrane, vacuole | 98.21 | 98.02 |
| CDY49922 | Canola | plasma membrane | 92.25 | 92.25 |
| CDY23466 | Canola | plasma membrane | 92.25 | 92.25 |
| CDX92030 | Canola | plasma membrane | 89.66 | 89.84 |
| AT3G03090.1 | Thale cress | plasma membrane | 88.67 | 88.67 |
| CDX74227 | Canola | cytosol, plasma membrane, vacuole | 84.49 | 87.99 |
| CDX92028 | Canola | cytosol, mitochondrion, peroxisome, vacuole | 81.91 | 85.83 |
| CDX85478 | Canola | plasma membrane | 80.72 | 80.4 |
| CDY38076 | Canola | cytosol, plasma membrane, vacuole | 80.12 | 80.28 |
| VIT_16s0039g02170.t01 | Wine grape | plasma membrane | 72.76 | 73.2 |
| KRH29016 | Soybean | plasma membrane | 71.77 | 72.06 |
| KRH24040 | Soybean | plasma membrane | 70.78 | 71.63 |
| Solyc03g096950.2.1 | Tomato | plasma membrane | 68.99 | 68.99 |
| PGSC0003DMT400001526 | Potato | plasma membrane | 68.99 | 68.99 |
| GSMUA_Achr11P... | Banana | plasma membrane | 66.2 | 66.87 |
| TraesCS1A01G197200.1 | Wheat | plasma membrane | 65.01 | 66.06 |
| TraesCS1D01G200700.1 | Wheat | plasma membrane | 65.01 | 66.06 |
| TraesCS1B01G211800.1 | Wheat | plasma membrane | 64.81 | 65.86 |
| HORVU1Hr1G051290.3 | Barley | peroxisome, plasma membrane | 65.41 | 65.54 |
| Os10t0579200-01 | Rice | plasma membrane | 65.01 | 65.14 |
| CDY47336 | Canola | golgi, plasma membrane | 33.6 | 64.75 |
| EER91860 | Sorghum | plasma membrane | 63.02 | 62.04 |
| Zm00001d014435_P004 | Maize | plasma membrane | 63.82 | 59.23 |
| CDY33006 | Canola | plastid | 57.65 | 52.25 |
| CDY54245 | Canola | plastid | 57.85 | 52.06 |
| CDY33275 | Canola | extracellular, golgi, vacuole | 8.15 | 34.45 |
| CDY65623 | Canola | plasma membrane | 30.02 | 22.37 |
| CDX69128 | Canola | plasma membrane | 30.02 | 22.11 |
| CDY31497 | Canola | plasma membrane | 27.24 | 21.68 |
| CDY29502 | Canola | plasma membrane | 27.24 | 20.79 |
| CDX75492 | Canola | plasma membrane | 30.22 | 20.54 |
| CDY33276 | Canola | plasma membrane | 27.24 | 20.51 |
| CDX78009 | Canola | plasma membrane | 27.04 | 20.33 |
| CDY16303 | Canola | plasma membrane | 27.04 | 20.3 |
| CDX73717 | Canola | plasma membrane | 26.84 | 19.82 |
| CDY33650 | Canola | plasma membrane | 27.04 | 19.51 |
| CDX96618 | Canola | plasma membrane | 27.24 | 18.9 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.2 | GO:A0A078GTA6 | UniProt:A0A078GTA6 | EnsemblPlants:CDY28736 | ProteinID:CDY28736 |
| ProteinID:CDY28736.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00041374001 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 |
| ScanProsite:PS00217 | PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF159 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt |
| InterPro:Sugar_transporter_CS | TIGRFAMs:TIGR00879 | TMHMM:TMhelix | UniParc:UPI0004EF1881 | SEG:seg | : |
Description
BnaCnng06220DBnaCnng06220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTA6]
Coordinates
chrLK032225:-:477902..481337
Molecular Weight (calculated)
53666.0 Da
IEP (calculated)
8.589
GRAVY (calculated)
0.754
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFDAEKQSI VSLGQIGDSS SGEISSEKQP LIKENHHSPE NYSVLAAIPP FLFPALGALL FGYEIGATSC ATISIKSPKL SGISWYNLSS VDVGIITSGS
101: LYGALIGSIV AFSVADIIGR RKELILAALL YLVGAIVTAV APVFYVLIIG RLMYGIGVGL TMHAAPMYIA ETAPSQIRGR MISLKEFFTV LGMVGGYGIG
201: SLWVTVTSGW RYMYATIIPL AVIMGIGMCW LPASPRWLLL RSLQGKGNVE RLQQAAIKSL RRLRGSVVVD SAAEQVNEIL AELSSVGEDK EATLGELFQG
301: KCLKALTIAG GLVLLQQITG QPSVLYYAPS ILQTAGFSAA TDATRISILL GLLKLVMTGV AVIVIDRLGR RPLLLGGVSG MMISLFLLGS YYIFYTTVPA
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISI AVLVNFGTNA LVTFAFSPLK ELLGAGVLFC GFGVICVVSL FFIYFIVPET KGLTLEEIEA
501: KCL
101: LYGALIGSIV AFSVADIIGR RKELILAALL YLVGAIVTAV APVFYVLIIG RLMYGIGVGL TMHAAPMYIA ETAPSQIRGR MISLKEFFTV LGMVGGYGIG
201: SLWVTVTSGW RYMYATIIPL AVIMGIGMCW LPASPRWLLL RSLQGKGNVE RLQQAAIKSL RRLRGSVVVD SAAEQVNEIL AELSSVGEDK EATLGELFQG
301: KCLKALTIAG GLVLLQQITG QPSVLYYAPS ILQTAGFSAA TDATRISILL GLLKLVMTGV AVIVIDRLGR RPLLLGGVSG MMISLFLLGS YYIFYTTVPA
401: VAVVALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISI AVLVNFGTNA LVTFAFSPLK ELLGAGVLFC GFGVICVVSL FFIYFIVPET KGLTLEEIEA
501: KCL
001: MGFDPENQSI SSVGQVVGDS SSGGITAEKE PLLKENHSPE NYSVLAAIPP FLFPALGALL FGYEIGATSC AIMSLKSPTL SGISWYDLSS VDVGIITSGS
101: LYGALIGSIV AFSVADIIGR RKELILAAFL YLVGAIVTVV APVFSILIIG RVTYGMGIGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV LGMVGGYGIG
201: SLWITVISGW RYMYATILPF PVIMGTGMCW LPASPRWLLL RALQGQGNGE NLQQAAIRSL CRLRGSVIAD SAAEQVNEIL AELSLVGEDK EATFGELFRG
301: KCLKALTIAG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA ADATRISILL GLLKLVMTGV SVIVIDRVGR RPLLLCGVSG MVISLFLLGS YYMFYKNVPA
401: VAVAALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISL AVLVNFGANA LVTFAFSPLK ELLGAGILFC AFGVICVVSL FFIYYIVPET KGLTLEEIEA
501: KCL
101: LYGALIGSIV AFSVADIIGR RKELILAAFL YLVGAIVTVV APVFSILIIG RVTYGMGIGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV LGMVGGYGIG
201: SLWITVISGW RYMYATILPF PVIMGTGMCW LPASPRWLLL RALQGQGNGE NLQQAAIRSL CRLRGSVIAD SAAEQVNEIL AELSLVGEDK EATFGELFRG
301: KCLKALTIAG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA ADATRISILL GLLKLVMTGV SVIVIDRVGR RPLLLCGVSG MVISLFLLGS YYMFYKNVPA
401: VAVAALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISL AVLVNFGANA LVTFAFSPLK ELLGAGILFC AFGVICVVSL FFIYYIVPET KGLTLEEIEA
501: KCL
Arabidopsis Description
AtVGT1D-xylose-proton symporter-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Z8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.