Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 4
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- extracellular 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016448.1-P | Field mustard | plasma membrane | 99.72 | 99.59 |
| CDY33650 | Canola | plasma membrane | 94.9 | 98.71 |
| CDY31497 | Canola | plasma membrane | 80.55 | 92.41 |
| CDY29502 | Canola | plasma membrane | 83.72 | 92.11 |
| AT1G20840.2 | Thale cress | golgi, plasma membrane | 91.86 | 90.74 |
| CDY33275 | Canola | extracellular, golgi, vacuole | 11.31 | 68.91 |
| KRH60881 | Soybean | endoplasmic reticulum | 67.45 | 66.26 |
| KRH51563 | Soybean | endoplasmic reticulum | 67.17 | 66.08 |
| VIT_18s0122g00850.t01 | Wine grape | plasma membrane | 65.24 | 63.92 |
| CDY65623 | Canola | plasma membrane | 58.76 | 63.11 |
| PGSC0003DMT400025886 | Potato | plasma membrane | 64.0 | 62.96 |
| Solyc04g082700.2.1 | Tomato | endoplasmic reticulum | 64.0 | 62.87 |
| CDX69128 | Canola | plasma membrane | 58.62 | 62.23 |
| CDX75492 | Canola | plasma membrane | 62.76 | 61.49 |
| CDY33276 | Canola | plasma membrane | 52.41 | 56.89 |
| CDY16303 | Canola | plasma membrane | 52.41 | 56.72 |
| CDX78009 | Canola | plasma membrane | 52.0 | 56.35 |
| CDX73717 | Canola | plasma membrane | 52.55 | 55.95 |
| CDY38076 | Canola | cytosol, plasma membrane, vacuole | 19.17 | 27.69 |
| CDY43152 | Canola | cytosol, plasma membrane, vacuole | 19.03 | 27.38 |
| CDX85478 | Canola | plasma membrane | 19.03 | 27.33 |
| CDY28736 | Canola | cytosol, plasma membrane, vacuole | 18.9 | 27.24 |
| CDX92030 | Canola | plasma membrane | 18.76 | 27.09 |
| CDX74227 | Canola | cytosol, plasma membrane, vacuole | 17.93 | 26.92 |
| CDY49922 | Canola | plasma membrane | 18.21 | 26.24 |
| CDY23466 | Canola | plasma membrane | 18.21 | 26.24 |
| CDY33006 | Canola | plastid | 20.0 | 26.13 |
| CDX92028 | Canola | cytosol, mitochondrion, peroxisome, vacuole | 17.1 | 25.83 |
| CDY54245 | Canola | plastid | 19.86 | 25.76 |
| CDY47336 | Canola | golgi, plasma membrane | 7.59 | 21.07 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | GO:A0A078EB75 | EnsemblPlants:CDX96618 | ProteinID:CDX96618 | ProteinID:CDX96618.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00102821001 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 | ScanProsite:PS00217 |
| PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF180 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS |
| TMHMM:TMhelix | UniParc:UPI0004EF0F30 | SEG:seg | : | : | : |
Description
BnaA08g21610D
Coordinates
chrLK031895:+:280122..283365
Molecular Weight (calculated)
78895.3 Da
IEP (calculated)
5.234
GRAVY (calculated)
0.282
Length
725 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGATLVALA ATIGNFLQGW DNATIAGAMV YINKDMNLPT SVQGLVVAMS LIGATVITTC SGPISDWLGR RPMLILSSVM YFLSGLIMWW SPSVYVLCLA
101: RLLDGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSEAPS WRGMLGVLSI PSLVYLFFTV FYLPESPRWL VSKGRMDEAK
201: KVLQQLCGRE DVTDEMALLV EGLDIGGEKT LEDLLVTLDD HETLETVNED GQMRLLGTHE NQSYIARPVP EQQSSMFLRS RHGSLANQSM ILKDPLVGLF
301: DSLHEKMVPE AAGGNTRSGI FPHFGSMFST NADGKPPHWE KDVESQFNKD HDDYATDDNA ADDDSDNDLR SPLMSRQTTS MDKDMIPHPT GGSTLSMRRH
401: STLTGETNMG IGNGWHMGYR YDNGEYKRYY LKEDNAESRR GSIISLPGGQ DGGSYIHASA LVSKSVLGPK SIHGSAMVPP EKTATTGPLW SALLEPGVKR
501: ALVVGVGIQI LQQFSGINGV LYYTPQILER AGVDILLSSF GLSSISASFL ISGLTTLLML PSIVVAMRLM DVSGRRALLL WTIPVLILSL IVLVISELVH
601: ISKVVNAALS TACVILYFCF FVMGYGPIPN ILCSEIFPTR VRGLCIAICA MVFWIGDIIV TYSLPVLLSS IGLVGVFIIY GAVCVISWIF VYMKVPETKG
701: MPLEVITDYF AFGAQAQASA PSKDI
101: RLLDGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSEAPS WRGMLGVLSI PSLVYLFFTV FYLPESPRWL VSKGRMDEAK
201: KVLQQLCGRE DVTDEMALLV EGLDIGGEKT LEDLLVTLDD HETLETVNED GQMRLLGTHE NQSYIARPVP EQQSSMFLRS RHGSLANQSM ILKDPLVGLF
301: DSLHEKMVPE AAGGNTRSGI FPHFGSMFST NADGKPPHWE KDVESQFNKD HDDYATDDNA ADDDSDNDLR SPLMSRQTTS MDKDMIPHPT GGSTLSMRRH
401: STLTGETNMG IGNGWHMGYR YDNGEYKRYY LKEDNAESRR GSIISLPGGQ DGGSYIHASA LVSKSVLGPK SIHGSAMVPP EKTATTGPLW SALLEPGVKR
501: ALVVGVGIQI LQQFSGINGV LYYTPQILER AGVDILLSSF GLSSISASFL ISGLTTLLML PSIVVAMRLM DVSGRRALLL WTIPVLILSL IVLVISELVH
601: ISKVVNAALS TACVILYFCF FVMGYGPIPN ILCSEIFPTR VRGLCIAICA MVFWIGDIIV TYSLPVLLSS IGLVGVFIIY GAVCVISWIF VYMKVPETKG
701: MPLEVITDYF AFGAQAQASA PSKDI
001: MKGATLVALA ATIGNFLQGW DNATIAGAMV YINKDLNLPT SVQGLVVAMS LIGATVITTC SGPISDWLGR RPMLILSSVM YFVCGLIMLW SPNVYVLCFA
101: RLLNGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV FYLPESPRWL VSKGRMDEAK
201: RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV
301: NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL
401: SMRRHSTLMQ GNGESSMGIG GGWHMGYRYE NDEYKRYYLK EDGAESRRGS IISIPGGPDG GGSYIHASAL VSRSVLGPKS VHGSAMVPPE KIAASGPLWS
501: ALLEPGVKRA LVVGVGIQIL QQFSGINGVL YYTPQILERA GVDILLSSLG LSSISASFLI SGLTTLLMLP AIVVAMRLMD VSGRRSLLLW TIPVLIVSLV
601: VLVISELIHI SKVVNAALST GCVVLYFCFF VMGYGPIPNI LCSEIFPTRV RGLCIAICAM VFWIGDIIVT YSLPVLLSSI GLVGVFSIYA AVCVISWIFV
701: YMKVPETKGM PLEVITDYFA FGAQAQASAP SKDI
101: RLLNGFGAGL AVTLVPVYIS ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV FYLPESPRWL VSKGRMDEAK
201: RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV
301: NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL
401: SMRRHSTLMQ GNGESSMGIG GGWHMGYRYE NDEYKRYYLK EDGAESRRGS IISIPGGPDG GGSYIHASAL VSRSVLGPKS VHGSAMVPPE KIAASGPLWS
501: ALLEPGVKRA LVVGVGIQIL QQFSGINGVL YYTPQILERA GVDILLSSLG LSSISASFLI SGLTTLLMLP AIVVAMRLMD VSGRRSLLLW TIPVLIVSLV
601: VLVISELIHI SKVVNAALST GCVVLYFCFF VMGYGPIPNI LCSEIFPTRV RGLCIAICAM VFWIGDIIVT YSLPVLLSSI GLVGVFSIYA AVCVISWIFV
701: YMKVPETKGM PLEVITDYFA FGAQAQASAP SKDI
Arabidopsis Description
MSSP1TMT1 [Source:UniProtKB/TrEMBL;Acc:A0A178W059]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.