Factsheet for VIT_18s0122g00850.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 4
plasma membrane 6
vacuole 3
golgi 3
extracellular 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60881	Soybean	endoplasmic reticulum	79.19	79.4
PGSC0003DMT400025886	Potato	plasma membrane	79.05	79.38
Solyc04g082700.2.1	Tomato	endoplasmic reticulum	79.05	79.27
KRH51563	Soybean	endoplasmic reticulum	78.78	79.1
VIT_03s0038g03940.t01	Wine grape	plasma membrane	75.27	75.37
VIT_07s0031g02270.t01	Wine grape	plasma membrane	74.46	74.26
CDY31497	Canola	plasma membrane	58.11	68.04
CDY29502	Canola	plasma membrane	59.86	67.22
CDY33650	Canola	plasma membrane	62.03	65.85
AT1G20840.2	Thale cress	golgi, plasma membrane	64.86	65.4
CDX96618	Canola	plasma membrane	63.92	65.24
Bra016448.1-P	Field mustard	plasma membrane	63.92	65.15
Bra025848.1-P	Field mustard	plasma membrane	62.97	64.63
VIT_16s0039g02170.t01	Wine grape	plasma membrane	20.68	30.6
VIT_06s0004g05190.t01	Wine grape	golgi, mitochondrion, plasma membrane, plastid	20.81	30.37

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100232977	wikigene:100232977	MapMan:24.2.2.1.4	ProteinID:AAX47312	ProteinID:AAX47312.1
ProteinID:AAY40466	ProteinID:AAY40466.1	ProteinID:ADP37147	ProteinID:ADP37147.1	EMBL:AM459489	EMBL:AY861386
ProteinID:CAN59780	ProteinID:CAN59780.1	ProteinID:CCB62668	ProteinID:CCB62668.1	ncoils:Coil	EMBL:DQ017393
EMBL:FN596759	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	EMBL:HQ323282
EntrezGene:HT6	wikigene:HT6	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf
RefSeq:NP_001267873.1	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF180	UniProt:Q4U339	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGR:TC62520	TIGR:TC65400	TIGR:TC69248	TMHMM:TMhelix	UniParc:UPI000051940E	ArrayExpress:VIT_18s0122g00850
EnsemblPlantsGene:VIT_18s0122g00850	EnsemblPlants:VIT_18s0122g00850.t01	unigene:Vvi.521	unigene:Vvi.5954	RefSeq:XP_019082260.1	SEG:seg

Description

Putative hexose transporter [Source:UniProtKB/TrEMBL;Acc:Q4U339]

Coordinates

chr18:+:613496..619041

Molecular Weight (calculated)

79460.4 Da

IEP (calculated)

4.599

GRAVY (calculated)

0.401

Length

740 amino acids

Sequence
(BLAST)

001: MNGAVLVAIA AAIGNFLQGW DNATIAGAIV YIKKELDLES TVEGLVVAMS LIGATLVTTC SGAISDWIGR RPMLIVSSML YFISGLIMLW SPNVYVLLIA
101: RLLDGFGIGL AVTLVPIYIS ETAPADIRGS LNTLPQFTGS GGMFLSYCMV FGMSLLSSPS WRLMLGILSI PSLLYFALTV FYLPESPRWL VSKGRMVEAK
201: KVLQRLRGRE DVSAEMALLV EGLGIGGETS IEEYIIGPTG ELTEDQDPDA VKDQIKLYGP EAGLSWVAKP VPGGQSTLSL VSRQGSLATQ TLPLMDPLVT
301: LFGSVHEKLP ETGSMRSMLF PNFGSMFSTA DPQIKTEQWD EESLQREGED YASDGGGDSD HDLQSPLISR QTSSMEKDMV PPPSHSSIMS MRRHSSLMQG
401: TAGEAAGGMG IGGGWQLAWK WSEREGEDGK KEGGFKRIYL HEEGVPGSRR GSLVSLPGGD VPAEGDYIQA AALVSQPALY SKELMDQDPV GPAMVHPAET
501: ASRGPMWAAL LEPGVKHALF VGAGIQILQQ FSGINGVLYY TPQILEEAGV EVLLESLGLG TESASFLISA FTTLLMLPCI VVAMKLMDIV GRRRLLLTTI
601: PVLIVTLLVL VIGDLVTTTT VIHAAISTAC VIIYFCCFVT AYGPIPNILC SEIFPTRVRG LCIAICALVY WIGDIIVTYT LPVMLTSIGL TGIFGIYAVV
701: CVISWVFVFL KVPETKGMPL EVIAEFFAVG ARQVTAAKND

Best Arabidopsis Sequence Match ( AT4G35300.4 )
(BLAST)

001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE

Arabidopsis Description

TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.