CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 8
endoplasmic reticulum 3
vacuole 3
golgi 3
extracellular 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011604.1-P	Field mustard	plasma membrane	100.0	100.0
CDY65623	Canola	plasma membrane	90.27	98.96
CDX69128	Canola	plasma membrane	91.22	98.83
AT4G35300.7	Thale cress	plasma membrane	93.78	93.91
PGSC0003DMT400038021	Potato	extracellular	25.68	80.17
CDY33275	Canola	extracellular, golgi, vacuole	12.43	77.31
KRH60612	Soybean	plasma membrane	73.51	74.11
KRH14010	Soybean	plasma membrane	66.89	73.88
KRH51319	Soybean	nucleus, plasma membrane	73.51	73.71
KRH74104	Soybean	plasma membrane	70.54	73.42
VIT_03s0038g03940.t01	Wine grape	plasma membrane	72.57	72.67
CDY31497	Canola	plasma membrane	56.35	65.98
CDY29502	Canola	plasma membrane	58.38	65.55
CDY33276	Canola	plasma membrane	58.24	64.52
CDY16303	Canola	plasma membrane	58.24	64.33
CDX78009	Canola	plasma membrane	58.11	64.28
CDX73717	Canola	plasma membrane	58.65	63.73
CDY33650	Canola	plasma membrane	59.86	63.56
CDX96618	Canola	plasma membrane	61.49	62.76
CDY28736	Canola	cytosol, plasma membrane, vacuole	20.54	30.22
CDY43152	Canola	cytosol, plasma membrane, vacuole	20.54	30.16
CDY23466	Canola	plasma membrane	19.86	29.22
CDY49922	Canola	plasma membrane	19.73	29.03
CDY38076	Canola	cytosol, plasma membrane, vacuole	19.59	28.88
CDX92030	Canola	plasma membrane	19.46	28.69
CDX85478	Canola	plasma membrane	19.46	28.51
CDY33006	Canola	plastid	21.35	28.47
CDX74227	Canola	cytosol, plasma membrane, vacuole	18.51	28.36
CDY54245	Canola	plastid	21.22	28.09
CDX92028	Canola	cytosol, mitochondrion, peroxisome, vacuole	18.11	27.92
CDY47336	Canola	golgi, plasma membrane	8.92	25.29

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.4	GO:A0A078CFC8	EnsemblPlants:CDX75492	ProteinID:CDX75492	ProteinID:CDX75492.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00121389001	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF180	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TMHMM:TMhelix	UniParc:UPI000254712E	SEG:seg	:	:	:

Description

BnaA01g02100D

Coordinates

chrLK031804:-:1370896..1374454

Molecular Weight (calculated)

79914.5 Da

IEP (calculated)

5.177

GRAVY (calculated)

0.320

Length

740 amino acids

Sequence
(BLAST)

001: MSGAVLVAVA AAIGNLLQGW DNATIAGAVL YIKKEFHLES NPSMEGLIVA MSLIGATLIT TWSGGVADWL GRRPMLILSS VLYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FVPSLVFFFL TIFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADDVANDLDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTVS VLSRHGSTMS RRQGSLVDPL
301: VTLFGSVHEK MPETGSMRSA LFPHFGSMFS VGGNQTRNEE WDEENLVGEG EDYPTDRGED SDDDLHSPLI SRQTTSMEKD MHSGHGPLST FRHGSQVQGA
401: HGEGGGAGSM GIGGGWQVAW KWTEREDESG QKEGGFKRIY LHQEGFPGSR RGSIVSLPGG EGTGEAEFVQ ASALVSQPAL YSKDLLREHT IGPAMVHPSE
501: TVKGSLWHDL QDPGVKRALF VGVGLQILQQ FSGINGVLYY TPQILEQAGV GILLSNLGIS SSSSSLLISA LTTFVMLPAI AVAMRLMDLS GRRTLLLTTI
601: PILIASLIVL VISNLVHMNS IVHAVLSTVS VVLYFCFFVM GFGPTPNILC SEIFPTRVRG ICIAICALTF WICDIIVTYS LPVLLKSIGL AGVFGMYAVV
701: CCISWAFVYL EVPETKGMPL EVITEFFSVG ARQAEAEKNN

Best Arabidopsis Sequence Match ( AT4G35300.4 )
(BLAST)

001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE

Arabidopsis Description

TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.