Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 8
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
- extracellular 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011604.1-P | Field mustard | plasma membrane | 93.91 | 93.78 |
| CDX75492 | Canola | plasma membrane | 93.91 | 93.78 |
| CDY65623 | Canola | plasma membrane | 85.66 | 93.78 |
| CDX69128 | Canola | plasma membrane | 86.6 | 93.7 |
| PGSC0003DMT400038021 | Potato | extracellular | 25.3 | 78.9 |
| KRH14010 | Soybean | plasma membrane | 68.06 | 75.07 |
| KRH60612 | Soybean | plasma membrane | 73.75 | 74.25 |
| KRH51319 | Soybean | nucleus, plasma membrane | 73.88 | 73.98 |
| KRH74104 | Soybean | plasma membrane | 70.91 | 73.7 |
| VIT_03s0038g03940.t01 | Wine grape | plasma membrane | 73.21 | 73.21 |
| AT1G20840.2 | Thale cress | golgi, plasma membrane | 63.06 | 63.49 |
| AT3G51490.2 | Thale cress | plasma membrane | 62.11 | 62.28 |
| AT5G17010.4 | Thale cress | plasma membrane | 19.76 | 29.03 |
| AT3G03090.1 | Thale cress | plasma membrane | 19.08 | 28.03 |
| AT5G59250.1 | Thale cress | plastid | 20.57 | 27.24 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.4 | EntrezGene:829684 | UniProt:A0A178V1T0 | ProteinID:AEE86493.1 | ProteinID:AEE86497.1 |
| ProteinID:ANM66216.1 | ProteinID:ANM66217.1 | ProteinID:ANM66218.1 | ProteinID:ANM66220.1 | ProteinID:ANM66221.1 | ArrayExpress:AT4G35300 |
| EnsemblPlantsGene:AT4G35300 | RefSeq:AT4G35300 | TAIR:AT4G35300 | RefSeq:AT4G35300-TAIR-G | EnsemblPlants:AT4G35300.7 | EMBL:AY094465 |
| Unigene:At.27703 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | RefSeq:NP_001190923.1 | RefSeq:NP_001328125.1 | RefSeq:NP_001328126.1 | RefSeq:NP_001328127.1 |
| RefSeq:NP_001328129.1 | RefSeq:NP_001328130.1 | RefSeq:NP_849565.1 | ProteinID:OAO99324.1 | PFAM:PF00083 | PRINTS:PR00171 |
| ScanProsite:PS00216 | ScanProsite:PS00217 | PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF180 | SUPFAM:SSF103473 |
| InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS | Symbol:TMT2 | TMHMM:TMhelix | UniParc:UPI00000A22BB | SEG:seg |
Description
TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
Coordinates
chr4:-:16795783..16799811
Molecular Weight (calculated)
79730.4 Da
IEP (calculated)
5.351
GRAVY (calculated)
0.334
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
101: LGRLLDGFGV GLVVTLVPIY ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL TVFFLPESPR WLVSKGRMLE
201: AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL
301: VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG
401: AQGEGAGSMG IGGGWQVAWK WTEREDESGQ KEGGFKRIYL HQEGFPGSRR GSIVSLPGGD GTGEADFVQA SALVSQPALY SKDLLKEHTI GPAMVHPSET
501: TKGSIWHDLH DPGVKRALVV GVGLQILQQF SGINGVLYYT PQILEQAGVG ILLSNMGISS SSASLLISAL TTFVMLPAIA VAMRLMDLSG RRTLLLTTIP
601: ILIASLLVLV ISNLVHMNSI VHAVLSTVSV VLYFCFFVMG FGPAPNILCS EIFPTRVRGI CIAICALTFW ICDIIVTYSL PVLLKSIGLA GVFGMYAIVC
701: CISWVFVFIK VPETKGMPLE VITEFFSVGA RQAEAAKNE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.