Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- endoplasmic reticulum 1
- plasma membrane 2
- vacuole 2
- golgi 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001072.1-P | Field mustard | plasma membrane | 73.08 | 94.13 |
| CDX92030 | Canola | plasma membrane | 94.2 | 90.64 |
| CDY43152 | Canola | cytosol, plasma membrane, vacuole | 88.41 | 84.72 |
| CDY28736 | Canola | cytosol, plasma membrane, vacuole | 87.99 | 84.49 |
| CDX92028 | Canola | cytosol, mitochondrion, peroxisome, vacuole | 83.64 | 84.17 |
| CDY49922 | Canola | plasma membrane | 87.58 | 84.1 |
| CDY23466 | Canola | plasma membrane | 87.58 | 84.1 |
| AT3G03090.1 | Thale cress | plasma membrane | 84.27 | 80.91 |
| CDX85478 | Canola | plasma membrane | 77.02 | 73.66 |
| CDY38076 | Canola | cytosol, plasma membrane, vacuole | 76.19 | 73.31 |
| KRH29016 | Soybean | plasma membrane | 70.19 | 67.66 |
| KRH24040 | Soybean | plasma membrane | 69.15 | 67.2 |
| VIT_16s0039g02170.t01 | Wine grape | plasma membrane | 69.36 | 67.0 |
| Solyc03g096950.2.1 | Tomato | plasma membrane | 67.08 | 64.41 |
| PGSC0003DMT400001526 | Potato | plasma membrane | 66.87 | 64.21 |
| TraesCS1D01G200700.1 | Wheat | plasma membrane | 64.6 | 63.03 |
| TraesCS1A01G197200.1 | Wheat | plasma membrane | 64.6 | 63.03 |
| TraesCS1B01G211800.1 | Wheat | plasma membrane | 64.39 | 62.83 |
| GSMUA_Achr11P... | Banana | plasma membrane | 63.98 | 62.05 |
| HORVU1Hr1G051290.3 | Barley | peroxisome, plasma membrane | 64.18 | 61.75 |
| CDY47336 | Canola | golgi, plasma membrane | 33.13 | 61.3 |
| Os10t0579200-01 | Rice | plasma membrane | 63.15 | 60.76 |
| EER91860 | Sorghum | plasma membrane | 61.28 | 57.93 |
| Zm00001d014435_P004 | Maize | plasma membrane | 62.11 | 55.35 |
| CDY33006 | Canola | plastid | 55.9 | 48.65 |
| CDY54245 | Canola | plastid | 56.11 | 48.48 |
| CDY33275 | Canola | extracellular, golgi, vacuole | 6.42 | 26.05 |
| CDY65623 | Canola | plasma membrane | 28.16 | 20.15 |
| CDY31497 | Canola | plasma membrane | 26.29 | 20.09 |
| CDX69128 | Canola | plasma membrane | 27.95 | 19.77 |
| CDY29502 | Canola | plasma membrane | 26.29 | 19.27 |
| CDY33276 | Canola | plasma membrane | 25.88 | 18.71 |
| CDX78009 | Canola | plasma membrane | 25.88 | 18.68 |
| CDX75492 | Canola | plasma membrane | 28.36 | 18.51 |
| CDY16303 | Canola | plasma membrane | 25.67 | 18.51 |
| CDY33650 | Canola | plasma membrane | 26.29 | 18.22 |
| CDX73717 | Canola | plasma membrane | 25.67 | 18.21 |
| CDX96618 | Canola | plasma membrane | 26.92 | 17.93 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.2 | GO:A0A078CBJ6 | EnsemblPlants:CDX74227 | ProteinID:CDX74227 | ProteinID:CDX74227.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00112008001 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 | ScanProsite:PS00217 |
| PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF159 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS |
| TIGRFAMs:TIGR00879 | TMHMM:TMhelix | UniParc:UPI0004EEEED8 | SEG:seg | : | : |
Description
BnaA03g28200D
Coordinates
chrLK031800:+:1872289..1875493
Molecular Weight (calculated)
51944.9 Da
IEP (calculated)
7.955
GRAVY (calculated)
0.761
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFDAEKQSI VHVEQVGDLS LIGLSSVQEP LIKQKHTPEN YSVLAAIPPF LFPALGTFLF GYEIGATSCA TISIKSPTLS GISWYNLSSV DVGIITSGSL
101: RKGLITAAFL YLIGAIVTAV APVFPVLIIG RVVYGIGVGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV FGMVGGYGIG SLWVTVISGW RYMYATVIPI
201: PVIMAIGMCW LPASPRWLLL RTLQGKGDVE SFQEEAIKSL RRLRGSVVVD RAAEQVDEIL AELSSVGEDK EATICELFQG KCLKALTIAG GLVLFQQITG
301: QPSVLYYAPS ILQTAGFSAA TDATRISILL GLLKLAMTGV AIIVIDKLGR RPLLLGGVSG MVLSLFLMGS YYIFYNNVPA VAVAALLLYV GCYQLSFGPI
401: SWLMMSEIFP LKLRGRGISI AVLVNFGTNA LVTFAFSPLK ELLGAGILFC VFGVICVLSL FFIYFIVPET KGLTLEEIEA KCL
101: RKGLITAAFL YLIGAIVTAV APVFPVLIIG RVVYGIGVGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV FGMVGGYGIG SLWVTVISGW RYMYATVIPI
201: PVIMAIGMCW LPASPRWLLL RTLQGKGDVE SFQEEAIKSL RRLRGSVVVD RAAEQVDEIL AELSSVGEDK EATICELFQG KCLKALTIAG GLVLFQQITG
301: QPSVLYYAPS ILQTAGFSAA TDATRISILL GLLKLAMTGV AIIVIDKLGR RPLLLGGVSG MVLSLFLMGS YYIFYNNVPA VAVAALLLYV GCYQLSFGPI
401: SWLMMSEIFP LKLRGRGISI AVLVNFGTNA LVTFAFSPLK ELLGAGILFC VFGVICVLSL FFIYFIVPET KGLTLEEIEA KCL
001: MGFDPENQSI SSVGQVVGDS SSGGITAEKE PLLKENHSPE NYSVLAAIPP FLFPALGALL FGYEIGATSC AIMSLKSPTL SGISWYDLSS VDVGIITSGS
101: LYGALIGSIV AFSVADIIGR RKELILAAFL YLVGAIVTVV APVFSILIIG RVTYGMGIGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV LGMVGGYGIG
201: SLWITVISGW RYMYATILPF PVIMGTGMCW LPASPRWLLL RALQGQGNGE NLQQAAIRSL CRLRGSVIAD SAAEQVNEIL AELSLVGEDK EATFGELFRG
301: KCLKALTIAG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA ADATRISILL GLLKLVMTGV SVIVIDRVGR RPLLLCGVSG MVISLFLLGS YYMFYKNVPA
401: VAVAALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISL AVLVNFGANA LVTFAFSPLK ELLGAGILFC AFGVICVVSL FFIYYIVPET KGLTLEEIEA
501: KCL
101: LYGALIGSIV AFSVADIIGR RKELILAAFL YLVGAIVTVV APVFSILIIG RVTYGMGIGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV LGMVGGYGIG
201: SLWITVISGW RYMYATILPF PVIMGTGMCW LPASPRWLLL RALQGQGNGE NLQQAAIRSL CRLRGSVIAD SAAEQVNEIL AELSLVGEDK EATFGELFRG
301: KCLKALTIAG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA ADATRISILL GLLKLVMTGV SVIVIDRVGR RPLLLCGVSG MVISLFLLGS YYMFYKNVPA
401: VAVAALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISL AVLVNFGANA LVTFAFSPLK ELLGAGILFC AFGVICVVSL FFIYYIVPET KGLTLEEIEA
501: KCL
Arabidopsis Description
AtVGT1D-xylose-proton symporter-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Z8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.