Factsheet for Bra001072.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
endoplasmic reticulum 1
vacuole 2
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74227	Canola	cytosol, plasma membrane, vacuole	94.13	73.08
Bra032018.1-P	Field mustard	plasma membrane	86.67	64.48
Bra021374.1-P	Field mustard	plasma membrane	85.87	64.02
AT3G03090.1	Thale cress	plasma membrane	82.67	61.63
Bra023592.1-P	Field mustard	cytosol, plasma membrane, vacuole	75.2	52.51
KRH29016	Soybean	plasma membrane	69.07	51.7
KRH24040	Soybean	plasma membrane	67.73	51.11
VIT_16s0039g02170.t01	Wine grape	plasma membrane	67.73	50.8
Solyc03g096950.2.1	Tomato	plasma membrane	65.33	48.71
PGSC0003DMT400001526	Potato	plasma membrane	65.07	48.51
TraesCS1A01G197200.1	Wheat	plasma membrane	62.93	47.68
TraesCS1B01G211800.1	Wheat	plasma membrane	62.93	47.68
TraesCS1D01G200700.1	Wheat	plasma membrane	62.93	47.68
HORVU1Hr1G051290.3	Barley	peroxisome, plasma membrane	61.87	46.22
GSMUA_Achr11P...	Banana	plasma membrane	61.33	46.18
Os10t0579200-01	Rice	plasma membrane	61.6	46.02
EER91860	Sorghum	plasma membrane	59.73	43.84
Zm00001d014435_P004	Maize	plasma membrane	60.53	41.88
Bra002596.1-P	Field mustard	plastid	51.73	34.95
Bra011604.1-P	Field mustard	plasma membrane	29.6	15.0
Bra025848.1-P	Field mustard	plasma membrane	26.13	13.59
Bra016448.1-P	Field mustard	plasma membrane	26.13	13.5
Bra038902.1-P	Field mustard	plasma membrane	25.33	12.96
Bra036794.1-P	Field mustard	plasma membrane	25.6	12.9

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.2	EnsemblPlantsGene:Bra001072	EnsemblPlants:Bra001072.1	EnsemblPlants:Bra001072.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4CA43	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF159	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TMHMM:TMhelix
UniParc:UPI00025408DF	SEG:seg	:	:	:	:

Description

AT3G03090 (E=3e-133) AtVGT1 | AtVGT1 (Arabidopsis thaliana vacuolar glucose transporter 1); carbohydrate transmembrane transporter/ fructose transmembrane transporter/ glucose transmembrane transporter/ sugar:hydrogen symporter

Coordinates

chrA03:-:14606948..14610037

Molecular Weight (calculated)

40053.1 Da

IEP (calculated)

7.700

GRAVY (calculated)

0.754

Length

375 amino acids

Sequence
(BLAST)

001: MSTKVGDLSL IGLSSVQEPL IKQKHTPENY SVLAAIPPFL FPALGTFLFG YEIGATSCAT ISIKSPTLSG ISWYNLSSVD VGIITSGSLY GALIGSIVAF
101: SIADIIGRRK GLITAAFLYL IGAIVTAVAP VFPVLIIGRV VYGIGVGLTM HAAPMYIAET APSQIRGRMI SLKEFSTVFG MVGGYGIGSL WVTVISGWRY
201: MYATVIPIPV IMAIGMCWLP ASPRWLLLRT LQGKGDVESF QEEAIKSLRR LRGSVVVDRA AEQVDEILAE LSSVGEDKEA TICELFQGKC LKALTIAGGL
301: VLFQQLAMTG VAIIVIDKLG RRPLLLGGVS GMELLGAGIL FCVFGVICVL SLFFIYFIVP ETKGLTLEEI EAKCL

Best Arabidopsis Sequence Match ( AT3G03090.1 )
(BLAST)

001: MGFDPENQSI SSVGQVVGDS SSGGITAEKE PLLKENHSPE NYSVLAAIPP FLFPALGALL FGYEIGATSC AIMSLKSPTL SGISWYDLSS VDVGIITSGS
101: LYGALIGSIV AFSVADIIGR RKELILAAFL YLVGAIVTVV APVFSILIIG RVTYGMGIGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV LGMVGGYGIG
201: SLWITVISGW RYMYATILPF PVIMGTGMCW LPASPRWLLL RALQGQGNGE NLQQAAIRSL CRLRGSVIAD SAAEQVNEIL AELSLVGEDK EATFGELFRG
301: KCLKALTIAG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA ADATRISILL GLLKLVMTGV SVIVIDRVGR RPLLLCGVSG MVISLFLLGS YYMFYKNVPA
401: VAVAALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISL AVLVNFGANA LVTFAFSPLK ELLGAGILFC AFGVICVVSL FFIYYIVPET KGLTLEEIEA
501: KCL

Arabidopsis Description

AtVGT1D-xylose-proton symporter-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Z8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.