Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- plasma membrane 5
- vacuole 4
- golgi 4
- extracellular 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0128932-00 | Rice | nucleus | 52.24 | 8.1 |
| Os10t0539900-01 | Rice | plasma membrane | 58.21 | 5.27 |
| Os11t0475600-01 | Rice | plasma membrane | 58.21 | 5.15 |
| Os02t0229400-01 | Rice | plasma membrane | 56.72 | 5.09 |
| Os03t0823100-01 | Rice | plasma membrane | 20.9 | 4.62 |
| Os11t0620400-01 | Rice | plasma membrane | 41.79 | 4.26 |
| Os10t0579200-01 | Rice | plasma membrane | 17.91 | 2.39 |
| Os02t0832100-00 | Rice | golgi, mitochondrion, plasma membrane, plastid | 0.0 | 0.0 |
| Os03t0823200-01 | Rice | extracellular, mitochondrion, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:35.2 | UniProt:A0A0P0WFS2 | ProteinID:BAS91396.1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | InterPro:MFS_sugar_transport-like | EnsemblPlantsGene:Os04g0654550 | EnsemblPlants:Os04t0654550-00 | PFAM:PF00083 | PANTHER:PTHR23500 |
| PANTHER:PTHR23500:SF165 | TMHMM:TMhelix | UniParc:UPI000393A2E3 | SEG:seg | : | : |
Description
General substrate transporter domain containing protein. (Os04t0654550-00)
Coordinates
chr4:+:33383015..33383987
Molecular Weight (calculated)
7397.6 Da
IEP (calculated)
7.345
GRAVY (calculated)
1.337
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: HILLGTIPIL LLSLAIMLVA NIMNMSTDLH AITSALCVIV YQCVFVMGFG PIPNILCAEI FRTWIRP
001: MLEAKRVLQR LRGREDVSGE MALLVEGLGI GGETTIEEYI IGPADEVTDD HDIAVDKDQI KLYGAEEGLS WVARPVKGGS TMSVLSRHGS TMSRRQGSLI
101: DPLVTLFGSV HEKMPDTGSM RSALFPHFGS MFSVGGNQPR HEDWDEENLV GEGEDYPSDH GDDSEDDLHS PLISRQTTSM EKDMPHTAHG TLSTFRHGSQ
201: VQGAQGEGAG SMGIGGGWQV AWKWTEREDE SGQKEGGFKR IYLHQEGFPG SRRGSIVSLP GGDGTGEADF VQASALVSQP ALYSKDLLKE HTIGPAMVHP
301: SETTKGSIWH DLHDPGVKRA LVVGVGLQIL QQFSGINGVL YYTPQILEQA GVGILLSNMG ISSSSASLLI SALTTFVMLP AIAVAMRLMD LSGRRTLLLT
401: TIPILIASLL VLVISNLVHM NSIVHAVLST VSVVLYFCFF VMGFGPAPNI LCSEIFPTRV RGICIAICAL TFWICDIIVT YSLPVLLKSI GLAGVFGMYA
501: IVCCISWVFV FIKVPETKGM PLEVITEFFS VGARQAEAAK NE
101: DPLVTLFGSV HEKMPDTGSM RSALFPHFGS MFSVGGNQPR HEDWDEENLV GEGEDYPSDH GDDSEDDLHS PLISRQTTSM EKDMPHTAHG TLSTFRHGSQ
201: VQGAQGEGAG SMGIGGGWQV AWKWTEREDE SGQKEGGFKR IYLHQEGFPG SRRGSIVSLP GGDGTGEADF VQASALVSQP ALYSKDLLKE HTIGPAMVHP
301: SETTKGSIWH DLHDPGVKRA LVVGVGLQIL QQFSGINGVL YYTPQILEQA GVGILLSNMG ISSSSASLLI SALTTFVMLP AIAVAMRLMD LSGRRTLLLT
401: TIPILIASLL VLVISNLVHM NSIVHAVLST VSVVLYFCFF VMGFGPAPNI LCSEIFPTRV RGICIAICAL TFWICDIIVT YSLPVLLKSI GLAGVFGMYA
501: IVCCISWVFV FIKVPETKGM PLEVITEFFS VGARQAEAAK NE
Arabidopsis Description
TMT2TMT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1T0]
SUBAcon: [peroxisome,plasma membrane,cytosol]
SUBAcon: [peroxisome,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.