Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G345900.1 | Wheat | plastid | 64.32 | 84.77 |
| TraesCS7A01G338700.1 | Wheat | cytosol, plasma membrane, plastid | 63.32 | 82.35 |
| TraesCS7B01G250000.2 | Wheat | plastid | 55.28 | 64.71 |
| Os06t0359400-01 | Rice | plasma membrane | 49.25 | 62.82 |
| Zm00001d037067_P001 | Maize | cytosol, plasma membrane, plastid, vacuole | 44.22 | 54.66 |
| EES14576 | Sorghum | plastid | 43.22 | 52.44 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G083340.1 | EnsemblPlantsGene:HORVU7Hr1G083340 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:50S_L18Ae/Ribosomal_L18a/L20 |
| PANTHER:PTHR10052 | PANTHER:PTHR10052:SF13 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B4737CC | UniProt:A0A287X4E0 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:502009241..502012436
Molecular Weight (calculated)
21868.6 Da
IEP (calculated)
9.777
GRAVY (calculated)
0.067
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: SPPLRSSHDR STSTVYILPQ YRRHFPPLPE VHSAHHETSR SLEIRSSMAM QHTRDPTAKL PSAPPFAGAS PPPYHHHHYG TFSPPPPPPV AAAAYDPSLK
101: GRSAQGVVAF PCTIQQQVLV EGLPVREPRL PFCGVGVGWA LFLLGFFLAA IPWYIGAFLL FFVALDHREK PGLIACTVAG IFAVVPFMLN GIRMRPFFS
101: GRSAQGVVAF PCTIQQQVLV EGLPVREPRL PFCGVGVGWA LFLLGFFLAA IPWYIGAFLL FFVALDHREK PGLIACTVAG IFAVVPFMLN GIRMRPFFS
001: MGHGEEDKSK GFASEEGNQH HQYGTFQGVS NYPPPQNSAP VTGFPQPSAP PGVYDSGAPY YAHGYQTVPV HGGVAEGRPV RQRRLPCCGI GLGWFLFIVG
101: FFLGAIPWYV GLFIMMFGRR IDYREKPGYI ACTIAAILAT IAVILGVSKG ADDW
101: FFLGAIPWYV GLFIMMFGRR IDYREKPGYI ACTIAAILAT IAVILGVSKG ADDW
Arabidopsis Description
At1g17080/F6I1.24 [Source:UniProtKB/TrEMBL;Acc:Q9SHG7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.