Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g064260.2.1 | Tomato | extracellular | 25.64 | 31.25 |
| PGSC0003DMT400002698 | Potato | mitochondrion | 30.98 | 30.59 |
| KRH22109 | Soybean | plastid | 22.65 | 25.73 |
| GSMUA_Achr2P13780_001 | Banana | cytosol | 19.02 | 21.65 |
Protein Annotations
| EntrezGene:102660972 | MapMan:35.1 | EMBL:ACUP02012669 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:FBD |
| EnsemblPlantsGene:GLYMA_20G142600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | UniProt:K7N3F1 |
| EnsemblPlants:KRG91243 | ProteinID:KRG91243 | ProteinID:KRG91243.1 | PFAM:PF00646 | PFAM:PF08387 | PFscan:PS50181 |
| PANTHER:PTHR45380 | PANTHER:PTHR45380:SF1 | SMART:SM00256 | SMART:SM00579 | SUPFAM:SSF81383 | UniParc:UPI000294CA4A |
Description
hypothetical protein
Coordinates
chr20:+:38112582..38115537
Molecular Weight (calculated)
53402.4 Da
IEP (calculated)
6.625
GRAVY (calculated)
0.152
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MIEEGLSTCK AKFQKLNNKV NVDGHKDWIG NLPNEIIQHI LSLLPTKDAV KTSVLSRRWH SQWMFVRNLD FAEFPPNMNQ KRKLFMDFVD RVIALRKPLD
101: LNLFALVCEV FTDASRINSW VCAAVKHNVQ HLLLVLDQIH LEPLELPHCL FTCDTLRKAF IVADILLNLP SSIHFSNLKL LTLQYVVFPG YESTQRLFSG
201: LPVLEELTLD SCCWLNVEIV TIALPMLKKL DIKENLADQD NCQFFIIAEN LNSFYYIGTL RNDYWIYNSV SLDWGLMGLC STDDIGESSR LREVAQRAGR
301: LLRGISCAKE LLLTPYAFEV LTYSEYLCAC MPVLYKVTYL GFLSPGTAIN FGCRALAKFL EKLPCLELLV FQSGVCLSGN HEEGSWILDP VPSCFSRYLK
401: LIRISQFCGT DGELQVVKSL LKHAEILLQM DIICHHEKFS DGLARERDVL EKLQMLPRAS TYCTINIS
101: LNLFALVCEV FTDASRINSW VCAAVKHNVQ HLLLVLDQIH LEPLELPHCL FTCDTLRKAF IVADILLNLP SSIHFSNLKL LTLQYVVFPG YESTQRLFSG
201: LPVLEELTLD SCCWLNVEIV TIALPMLKKL DIKENLADQD NCQFFIIAEN LNSFYYIGTL RNDYWIYNSV SLDWGLMGLC STDDIGESSR LREVAQRAGR
301: LLRGISCAKE LLLTPYAFEV LTYSEYLCAC MPVLYKVTYL GFLSPGTAIN FGCRALAKFL EKLPCLELLV FQSGVCLSGN HEEGSWILDP VPSCFSRYLK
401: LIRISQFCGT DGELQVVKSL LKHAEILLQM DIICHHEKFS DGLARERDVL EKLQMLPRAS TYCTINIS
001: MDSEKMDLFS KLPDEVISHI LSSLPTKEAA STSVLAKKWR YLFAFVPSLD FNDSDFLHPQ EGKREKDGIL RSFMDFVDRV LALQGASPIK KFSLNVKTGV
101: DPDRVDRWIC NVLQRGVSHL ALFMDFEEEY SLPYEISVSK TLVELKTGYG VDLYLWDDDM FLPMLKTLVL ESVEFGRGQF QTLLPACPVL EELMLLNMEW
201: KDRNVILSSS SLKNLKITSE DGCLGTLSFD TPNLVFLDYY DYVAEDYPIV NLKNLVEVGI NLVLTADRIN RARDNVWNLI HGIQNAEIFH ISPVTFEVLS
301: LSCEAMPVFK NLTTLNIRTV MQQGWQAMPL LLKNCPNLET LYLGGLLHTV TNKCGDVCDC IPRKKKGRSL MACPVNKIQI QGFRGTIREV HMIKHFLDFC
401: PSLKEMEIIV ETKEPTLFEI PKWLEIVEDT LMQYNEMSSC TINYRVLAPL YWRWTRK
101: DPDRVDRWIC NVLQRGVSHL ALFMDFEEEY SLPYEISVSK TLVELKTGYG VDLYLWDDDM FLPMLKTLVL ESVEFGRGQF QTLLPACPVL EELMLLNMEW
201: KDRNVILSSS SLKNLKITSE DGCLGTLSFD TPNLVFLDYY DYVAEDYPIV NLKNLVEVGI NLVLTADRIN RARDNVWNLI HGIQNAEIFH ISPVTFEVLS
301: LSCEAMPVFK NLTTLNIRTV MQQGWQAMPL LLKNCPNLET LYLGGLLHTV TNKCGDVCDC IPRKKKGRSL MACPVNKIQI QGFRGTIREV HMIKHFLDFC
401: PSLKEMEIIV ETKEPTLFEI PKWLEIVEDT LMQYNEMSSC TINYRVLAPL YWRWTRK
Arabidopsis Description
Putative F-box protein At3g58860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXR6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.