Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g064260.2.1 | Tomato | extracellular | 74.89 | 92.45 |
| KRG91243 | Soybean | cytosol | 30.59 | 30.98 |
| GSMUA_Achr2P13780_001 | Banana | cytosol | 20.89 | 24.09 |
Protein Annotations
| EntrezGene:102578197 | MapMan:35.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:FBD | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:Leu-rich_rpt_2 | UniProt:M0ZKH4 | PFAM:PF00646 |
| PFAM:PF07723 | PFAM:PF08387 | EnsemblPlantsGene:PGSC0003DMG401001040 | PGSC:PGSC0003DMG401001040 | EnsemblPlants:PGSC0003DMT400002698 | PANTHER:PTHR32212 |
| PANTHER:PTHR32212:SF234 | SMART:SM00579 | SUPFAM:SSF52058 | SUPFAM:SSF81383 | UniParc:UPI000295308E | RefSeq:XP_006366040.1 |
| SEG:seg | : | : | : | : | : |
Description
F-box protein [Source:PGSC_GENE;Acc:PGSC0003DMG401001040]
Coordinates
chr7:+:54537404..54544001
Molecular Weight (calculated)
54211.0 Da
IEP (calculated)
7.330
GRAVY (calculated)
0.035
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIVSRSRW HTINSFKRHT ALEVHNPEGG EDKISNLHDS ILLHILSYLP TRDVVGTCIL STRWKNLWTC VENIDFDDSF LYSSRVFGYP MKVTSFMHFV
101: HRFLQLREES DIKKFRLSCR VCFSASHVCS WLSTVIRHNV QDLDLCLFVE EPFMLPQCVF SSKTLTSLKL EMNCVLELPT STCFPFLKTL HLCLVTFRDD
201: SSTQRLLSSC PMLRELAILD CEWMNLKQVA ISISSLKSLI IDDLPFFGST DDLNGCKIKI DAASLTFLKY SGYLSNEICL YNLSSSVNAS IHIPILYEKR
301: NQIAFRAVKL FRGLHKISAA RISNRAIESL FIADIEKDQL PIFYNLTHLE LSMELENHSI GPLKELLQCL PKLQSLHFSE GLDPCMHLCE DDWNLRSVPP
401: CFLSSLKTVK YSNFHGNDTE ISFLRNLLEI AIVLEKLNIV CSKRPFGDLK KQKEVEDQLR SGHGGSVSCA IKFM
101: HRFLQLREES DIKKFRLSCR VCFSASHVCS WLSTVIRHNV QDLDLCLFVE EPFMLPQCVF SSKTLTSLKL EMNCVLELPT STCFPFLKTL HLCLVTFRDD
201: SSTQRLLSSC PMLRELAILD CEWMNLKQVA ISISSLKSLI IDDLPFFGST DDLNGCKIKI DAASLTFLKY SGYLSNEICL YNLSSSVNAS IHIPILYEKR
301: NQIAFRAVKL FRGLHKISAA RISNRAIESL FIADIEKDQL PIFYNLTHLE LSMELENHSI GPLKELLQCL PKLQSLHFSE GLDPCMHLCE DDWNLRSVPP
401: CFLSSLKTVK YSNFHGNDTE ISFLRNLLEI AIVLEKLNIV CSKRPFGDLK KQKEVEDQLR SGHGGSVSCA IKFM
001: MDSEKMDLFS KLPDEVISHI LSSLPTKEAA STSVLAKKWR YLFAFVPSLD FNDSDFLHPQ EGKREKDGIL RSFMDFVDRV LALQGASPIK KFSLNVKTGV
101: DPDRVDRWIC NVLQRGVSHL ALFMDFEEEY SLPYEISVSK TLVELKTGYG VDLYLWDDDM FLPMLKTLVL ESVEFGRGQF QTLLPACPVL EELMLLNMEW
201: KDRNVILSSS SLKNLKITSE DGCLGTLSFD TPNLVFLDYY DYVAEDYPIV NLKNLVEVGI NLVLTADRIN RARDNVWNLI HGIQNAEIFH ISPVTFEVLS
301: LSCEAMPVFK NLTTLNIRTV MQQGWQAMPL LLKNCPNLET LYLGGLLHTV TNKCGDVCDC IPRKKKGRSL MACPVNKIQI QGFRGTIREV HMIKHFLDFC
401: PSLKEMEIIV ETKEPTLFEI PKWLEIVEDT LMQYNEMSSC TINYRVLAPL YWRWTRK
101: DPDRVDRWIC NVLQRGVSHL ALFMDFEEEY SLPYEISVSK TLVELKTGYG VDLYLWDDDM FLPMLKTLVL ESVEFGRGQF QTLLPACPVL EELMLLNMEW
201: KDRNVILSSS SLKNLKITSE DGCLGTLSFD TPNLVFLDYY DYVAEDYPIV NLKNLVEVGI NLVLTADRIN RARDNVWNLI HGIQNAEIFH ISPVTFEVLS
301: LSCEAMPVFK NLTTLNIRTV MQQGWQAMPL LLKNCPNLET LYLGGLLHTV TNKCGDVCDC IPRKKKGRSL MACPVNKIQI QGFRGTIREV HMIKHFLDFC
401: PSLKEMEIIV ETKEPTLFEI PKWLEIVEDT LMQYNEMSSC TINYRVLAPL YWRWTRK
Arabidopsis Description
Putative F-box protein At3g58860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXR6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.