Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56246 | Soybean | endoplasmic reticulum | 80.4 | 80.13 |
| KRH62711 | Soybean | endoplasmic reticulum | 80.4 | 80.13 |
| VIT_06s0009g01880.t01 | Wine grape | cytosol | 85.71 | 77.71 |
| KRG89789 | Soybean | plastid | 41.2 | 71.26 |
Protein Annotations
| EntrezGene:100788855 | Gene3D:2.60.40.640 | MapMan:22.5.5.3.3 | EMBL:ACUP02008111 | InterPro:Arrestin_C | EMBL:BT095261 |
| UniProt:C6TCH4 | EnsemblPlantsGene:GLYMA_13G074700 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008565 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0030904 | GO:GO:0042147 | InterPro:IPR014752 | InterPro:Ig_E-set | EnsemblPlants:KRH18662 | ProteinID:KRH18662 |
| ProteinID:KRH18662.1 | PFAM:PF03643 | PANTHER:PTHR12233 | PANTHER:PTHR12233:SF12 | SUPFAM:SSF81296 | UniParc:UPI0001B160F9 |
| InterPro:Vps26-related | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:17721685..17729903
Molecular Weight (calculated)
34955.3 Da
IEP (calculated)
6.940
GRAVY (calculated)
-0.287
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIIAGAFKP PCKISICLAD GSTPKQVRIK KENGQMVMVP LFQSQENIVG EVIIEPSNGK KVEHNGVKIE LLGQIELYFD RGNFYDFSSL VRELDVPGNL
101: YERKTYPFEF STVEMPYESY NGINVRLRYI LKVTISRNYV NNIVEYMDFV VRNYAPAPPI NNSIKMEVGI EECLHIEFEY GKSKYHLKDV IVGKIYFLLV
201: RIKIKTMELE VRRRESTGSG TNTYVETETL SKFELMDGVP VRGESIPVRL FLSPYELTPT YHNINNKFSV KYFLNLVLVD EEDRRYFKQQ EITVYRLSEN
301: S
101: YERKTYPFEF STVEMPYESY NGINVRLRYI LKVTISRNYV NNIVEYMDFV VRNYAPAPPI NNSIKMEVGI EECLHIEFEY GKSKYHLKDV IVGKIYFLLV
201: RIKIKTMELE VRRRESTGSG TNTYVETETL SKFELMDGVP VRGESIPVRL FLSPYELTPT YHNINNKFSV KYFLNLVLVD EEDRRYFKQQ EITVYRLSEN
301: S
001: MNYLLGAFKP ACNISITFTD GKNRKQVPTK KDNGQIVMNP LFQSQETIAG KINIEPYQGK KVEHNGVKVE LLGQIEMYFD RGNFYDFTSL VREIDVPGEI
101: YERKTYPFEF SSVEMPYETY NGVNVRLRYV LKVTVTRGYA GSIVEYQDFV VRNYVPLPPI NNSIKMEVGI EDCLHIEFEY NKSKYHLKDV ILGKIYFLLV
201: RIKIKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGAP VRGESIPVRV FLTPYDLTPT HKNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKEE
301: TS
101: YERKTYPFEF SSVEMPYETY NGVNVRLRYV LKVTVTRGYA GSIVEYQDFV VRNYVPLPPI NNSIKMEVGI EDCLHIEFEY NKSKYHLKDV ILGKIYFLLV
201: RIKIKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGAP VRGESIPVRV FLTPYDLTPT HKNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKEE
301: TS
Arabidopsis Description
VPS26AVacuolar protein sorting-associated protein 26A [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.